Protein–RNA interactions for Protein: Q9CPN7

1810009J06Rik, RIKEN cDNA 1810009J06 gene, mousemouse

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1810009J06RikQ9CPN7 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.24■□□□□ 0.99
1810009J06RikQ9CPN7 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.24■□□□□ 0.99
1810009J06RikQ9CPN7 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
1810009J06RikQ9CPN7 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.24■□□□□ 0.99
1810009J06RikQ9CPN7 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
1810009J06RikQ9CPN7 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
1810009J06RikQ9CPN7 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
1810009J06RikQ9CPN7 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
1810009J06RikQ9CPN7 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
1810009J06RikQ9CPN7 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.2■□□□□ 0.98
1810009J06RikQ9CPN7 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
1810009J06RikQ9CPN7 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
1810009J06RikQ9CPN7 Gm11599-201ENSMUST00000118720 878 ntBASIC21.19■□□□□ 0.98
1810009J06RikQ9CPN7 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.19■□□□□ 0.98
1810009J06RikQ9CPN7 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
1810009J06RikQ9CPN7 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
1810009J06RikQ9CPN7 Particl-201ENSMUST00000205370 1560 ntBASIC21.17■□□□□ 0.98
1810009J06RikQ9CPN7 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
1810009J06RikQ9CPN7 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.16■□□□□ 0.98
1810009J06RikQ9CPN7 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
1810009J06RikQ9CPN7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
1810009J06RikQ9CPN7 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
1810009J06RikQ9CPN7 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
1810009J06RikQ9CPN7 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
1810009J06RikQ9CPN7 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
1810009J06RikQ9CPN7 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
1810009J06RikQ9CPN7 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
1810009J06RikQ9CPN7 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.14■□□□□ 0.97
1810009J06RikQ9CPN7 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
1810009J06RikQ9CPN7 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.13■□□□□ 0.97
1810009J06RikQ9CPN7 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
1810009J06RikQ9CPN7 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.12■□□□□ 0.97
1810009J06RikQ9CPN7 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
1810009J06RikQ9CPN7 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
1810009J06RikQ9CPN7 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.12■□□□□ 0.97
1810009J06RikQ9CPN7 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
1810009J06RikQ9CPN7 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
1810009J06RikQ9CPN7 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
1810009J06RikQ9CPN7 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
1810009J06RikQ9CPN7 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
1810009J06RikQ9CPN7 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
1810009J06RikQ9CPN7 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
1810009J06RikQ9CPN7 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
1810009J06RikQ9CPN7 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
1810009J06RikQ9CPN7 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
1810009J06RikQ9CPN7 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
1810009J06RikQ9CPN7 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
1810009J06RikQ9CPN7 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
1810009J06RikQ9CPN7 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
1810009J06RikQ9CPN7 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
1810009J06RikQ9CPN7 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
1810009J06RikQ9CPN7 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
1810009J06RikQ9CPN7 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.05■□□□□ 0.96
1810009J06RikQ9CPN7 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
1810009J06RikQ9CPN7 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
1810009J06RikQ9CPN7 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
1810009J06RikQ9CPN7 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
1810009J06RikQ9CPN7 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.03■□□□□ 0.96
1810009J06RikQ9CPN7 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
1810009J06RikQ9CPN7 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
1810009J06RikQ9CPN7 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
1810009J06RikQ9CPN7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
1810009J06RikQ9CPN7 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
1810009J06RikQ9CPN7 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
1810009J06RikQ9CPN7 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.99■□□□□ 0.95
1810009J06RikQ9CPN7 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.99■□□□□ 0.95
1810009J06RikQ9CPN7 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
1810009J06RikQ9CPN7 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
1810009J06RikQ9CPN7 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
1810009J06RikQ9CPN7 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
1810009J06RikQ9CPN7 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
1810009J06RikQ9CPN7 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
1810009J06RikQ9CPN7 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
1810009J06RikQ9CPN7 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
1810009J06RikQ9CPN7 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.96■□□□□ 0.95
1810009J06RikQ9CPN7 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.96■□□□□ 0.95
1810009J06RikQ9CPN7 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
1810009J06RikQ9CPN7 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
1810009J06RikQ9CPN7 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
1810009J06RikQ9CPN7 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
1810009J06RikQ9CPN7 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
1810009J06RikQ9CPN7 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
1810009J06RikQ9CPN7 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
1810009J06RikQ9CPN7 Gm37136-201ENSMUST00000194368 194 ntBASIC20.93■□□□□ 0.94
1810009J06RikQ9CPN7 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
1810009J06RikQ9CPN7 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
1810009J06RikQ9CPN7 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
1810009J06RikQ9CPN7 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
1810009J06RikQ9CPN7 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
1810009J06RikQ9CPN7 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
1810009J06RikQ9CPN7 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.91■□□□□ 0.94
1810009J06RikQ9CPN7 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.91■□□□□ 0.94
1810009J06RikQ9CPN7 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.91■□□□□ 0.94
1810009J06RikQ9CPN7 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
1810009J06RikQ9CPN7 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
1810009J06RikQ9CPN7 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
1810009J06RikQ9CPN7 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.9■□□□□ 0.94
1810009J06RikQ9CPN7 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
1810009J06RikQ9CPN7 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
1810009J06RikQ9CPN7 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms