Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trim33Q99PP7 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Trim33Q99PP7 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Trim33Q99PP7 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Trim33Q99PP7 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Trim33Q99PP7 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Trim33Q99PP7 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Trim33Q99PP7 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trim33Q99PP7 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trim33Q99PP7 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trim33Q99PP7 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Trim33Q99PP7 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim33Q99PP7 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Trim33Q99PP7 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Trim33Q99PP7 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
Trim33Q99PP7 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
Trim33Q99PP7 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trim33Q99PP7 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.14■■□□□ 1.29
Trim33Q99PP7 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trim33Q99PP7 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Trim33Q99PP7 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Trim33Q99PP7 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim33Q99PP7 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim33Q99PP7 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.13■■□□□ 1.29
Trim33Q99PP7 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.12■■□□□ 1.29
Trim33Q99PP7 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.12■■□□□ 1.29
Trim33Q99PP7 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Trim33Q99PP7 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Trim33Q99PP7 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trim33Q99PP7 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.1■■□□□ 1.29
Trim33Q99PP7 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.09■■□□□ 1.29
Trim33Q99PP7 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim33Q99PP7 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.08■■□□□ 1.29
Trim33Q99PP7 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Trim33Q99PP7 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Trim33Q99PP7 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Trim33Q99PP7 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Trim33Q99PP7 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Trim33Q99PP7 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.07■■□□□ 1.28
Trim33Q99PP7 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Trim33Q99PP7 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.05■■□□□ 1.28
Trim33Q99PP7 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim33Q99PP7 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Trim33Q99PP7 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim33Q99PP7 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim33Q99PP7 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.04■■□□□ 1.28
Trim33Q99PP7 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.04■■□□□ 1.28
Trim33Q99PP7 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.04■■□□□ 1.28
Trim33Q99PP7 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim33Q99PP7 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim33Q99PP7 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Trim33Q99PP7 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Trim33Q99PP7 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Trim33Q99PP7 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim33Q99PP7 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.02■■□□□ 1.27
Trim33Q99PP7 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim33Q99PP7 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim33Q99PP7 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
Trim33Q99PP7 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trim33Q99PP7 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trim33Q99PP7 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trim33Q99PP7 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Trim33Q99PP7 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trim33Q99PP7 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trim33Q99PP7 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Trim33Q99PP7 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
Trim33Q99PP7 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Trim33Q99PP7 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.96■■□□□ 1.27
Trim33Q99PP7 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Trim33Q99PP7 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trim33Q99PP7 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Trim33Q99PP7 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Trim33Q99PP7 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Trim33Q99PP7 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trim33Q99PP7 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trim33Q99PP7 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
Trim33Q99PP7 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
Trim33Q99PP7 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
Trim33Q99PP7 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Trim33Q99PP7 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Trim33Q99PP7 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Trim33Q99PP7 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Trim33Q99PP7 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
Trim33Q99PP7 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
Trim33Q99PP7 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.88■■□□□ 1.25
Trim33Q99PP7 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Trim33Q99PP7 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Trim33Q99PP7 Particl-201ENSMUST00000205370 1560 ntBASIC22.88■■□□□ 1.25
Trim33Q99PP7 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Trim33Q99PP7 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Trim33Q99PP7 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.86■■□□□ 1.25
Trim33Q99PP7 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Trim33Q99PP7 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.85■■□□□ 1.25
Trim33Q99PP7 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Trim33Q99PP7 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Trim33Q99PP7 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Trim33Q99PP7 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.84■■□□□ 1.25
Trim33Q99PP7 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Trim33Q99PP7 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Trim33Q99PP7 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms