Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Pcdh15Q99PJ1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC28.1■■■□□ 2.09
Pcdh15Q99PJ1 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
Pcdh15Q99PJ1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Pcdh15Q99PJ1 AC154454.1-201ENSMUST00000225253 216 ntBASIC28.09■■■□□ 2.09
Pcdh15Q99PJ1 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Pcdh15Q99PJ1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
Pcdh15Q99PJ1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
Pcdh15Q99PJ1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Pcdh15Q99PJ1 Mir3960-201ENSMUST00000198213 73 ntBASIC28.07■■■□□ 2.08
Pcdh15Q99PJ1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Pcdh15Q99PJ1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Pcdh15Q99PJ1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Pcdh15Q99PJ1 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC28.05■■■□□ 2.08
Pcdh15Q99PJ1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Pcdh15Q99PJ1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC28.04■■■□□ 2.08
Pcdh15Q99PJ1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.04■■■□□ 2.08
Pcdh15Q99PJ1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Pcdh15Q99PJ1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Pcdh15Q99PJ1 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Pcdh15Q99PJ1 AC151971.4-201ENSMUST00000214717 704 ntBASIC27.98■■■□□ 2.07
Pcdh15Q99PJ1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Pcdh15Q99PJ1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC27.98■■■□□ 2.07
Pcdh15Q99PJ1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
Pcdh15Q99PJ1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Pcdh15Q99PJ1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Pcdh15Q99PJ1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC27.96■■■□□ 2.07
Pcdh15Q99PJ1 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC27.96■■■□□ 2.07
Pcdh15Q99PJ1 Gm22567-201ENSMUST00000175542 342 ntBASIC27.95■■■□□ 2.06
Pcdh15Q99PJ1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC27.94■■■□□ 2.06
Pcdh15Q99PJ1 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC27.94■■■□□ 2.06
Pcdh15Q99PJ1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Pcdh15Q99PJ1 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Pcdh15Q99PJ1 Gm5812-201ENSMUST00000061073 957 ntBASIC27.94■■■□□ 2.06
Pcdh15Q99PJ1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Pcdh15Q99PJ1 Gm14523-201ENSMUST00000117260 558 ntBASIC27.92■■■□□ 2.06
Pcdh15Q99PJ1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC27.92■■■□□ 2.06
Pcdh15Q99PJ1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Pcdh15Q99PJ1 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC27.92■■■□□ 2.06
Pcdh15Q99PJ1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Pcdh15Q99PJ1 Gm15039-201ENSMUST00000118914 875 ntBASIC27.91■■■□□ 2.06
Pcdh15Q99PJ1 Gm37136-201ENSMUST00000194368 194 ntBASIC27.91■■■□□ 2.06
Pcdh15Q99PJ1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Pcdh15Q99PJ1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Pcdh15Q99PJ1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC27.9■■■□□ 2.06
Pcdh15Q99PJ1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Pcdh15Q99PJ1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Pcdh15Q99PJ1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC27.9■■■□□ 2.06
Pcdh15Q99PJ1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Pcdh15Q99PJ1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
Pcdh15Q99PJ1 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
Pcdh15Q99PJ1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Pcdh15Q99PJ1 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC27.88■■■□□ 2.05
Pcdh15Q99PJ1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
Pcdh15Q99PJ1 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC27.87■■■□□ 2.05
Pcdh15Q99PJ1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Pcdh15Q99PJ1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Pcdh15Q99PJ1 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Pcdh15Q99PJ1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC27.85■■■□□ 2.05
Pcdh15Q99PJ1 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Pcdh15Q99PJ1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Pcdh15Q99PJ1 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Pcdh15Q99PJ1 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
Pcdh15Q99PJ1 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC27.83■■■□□ 2.05
Pcdh15Q99PJ1 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
Pcdh15Q99PJ1 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC27.83■■■□□ 2.05
Pcdh15Q99PJ1 Gm12818-201ENSMUST00000117562 1349 ntBASIC27.83■■■□□ 2.05
Pcdh15Q99PJ1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Pcdh15Q99PJ1 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Pcdh15Q99PJ1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC27.81■■■□□ 2.04
Pcdh15Q99PJ1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Pcdh15Q99PJ1 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Pcdh15Q99PJ1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Pcdh15Q99PJ1 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Pcdh15Q99PJ1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Pcdh15Q99PJ1 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC27.79■■■□□ 2.04
Pcdh15Q99PJ1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Pcdh15Q99PJ1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Pcdh15Q99PJ1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Pcdh15Q99PJ1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC27.77■■■□□ 2.04
Pcdh15Q99PJ1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Pcdh15Q99PJ1 Gm10420-201ENSMUST00000121713 882 ntBASIC27.75■■■□□ 2.03
Pcdh15Q99PJ1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC27.75■■■□□ 2.03
Pcdh15Q99PJ1 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC27.75■■■□□ 2.03
Pcdh15Q99PJ1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Pcdh15Q99PJ1 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC27.74■■■□□ 2.03
Pcdh15Q99PJ1 Gm5921-201ENSMUST00000075898 882 ntBASIC27.74■■■□□ 2.03
Pcdh15Q99PJ1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Pcdh15Q99PJ1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
Pcdh15Q99PJ1 Gm9910-201ENSMUST00000195385 1550 ntBASIC27.74■■■□□ 2.03
Pcdh15Q99PJ1 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Pcdh15Q99PJ1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Pcdh15Q99PJ1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Pcdh15Q99PJ1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC27.73■■■□□ 2.03
Pcdh15Q99PJ1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Pcdh15Q99PJ1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Pcdh15Q99PJ1 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Pcdh15Q99PJ1 Gm13889-201ENSMUST00000099689 1386 ntBASIC27.73■■■□□ 2.03
Pcdh15Q99PJ1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC27.73■■■□□ 2.03
Pcdh15Q99PJ1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC27.72■■■□□ 2.03
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms