Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Rtn4Q99P72 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Rtn4Q99P72 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Rtn4Q99P72 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC29.56■■■□□ 2.32
Rtn4Q99P72 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC29.56■■■□□ 2.32
Rtn4Q99P72 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC29.55■■■□□ 2.32
Rtn4Q99P72 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Rtn4Q99P72 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Rtn4Q99P72 Particl-201ENSMUST00000205370 1560 ntBASIC29.55■■■□□ 2.32
Rtn4Q99P72 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
Rtn4Q99P72 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC29.54■■■□□ 2.32
Rtn4Q99P72 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC29.54■■■□□ 2.32
Rtn4Q99P72 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC29.54■■■□□ 2.32
Rtn4Q99P72 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC29.54■■■□□ 2.32
Rtn4Q99P72 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC29.54■■■□□ 2.32
Rtn4Q99P72 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC29.52■■■□□ 2.32
Rtn4Q99P72 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Rtn4Q99P72 Gm6311-201ENSMUST00000073790 878 ntBASIC29.52■■■□□ 2.32
Rtn4Q99P72 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.32
Rtn4Q99P72 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
Rtn4Q99P72 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC29.5■■■□□ 2.31
Rtn4Q99P72 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Rtn4Q99P72 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Rtn4Q99P72 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Rtn4Q99P72 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC29.48■■■□□ 2.31
Rtn4Q99P72 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC29.48■■■□□ 2.31
Rtn4Q99P72 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Rtn4Q99P72 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Rtn4Q99P72 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Rtn4Q99P72 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Rtn4Q99P72 Gm11175-201ENSMUST00000116172 543 ntBASIC29.46■■■□□ 2.31
Rtn4Q99P72 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Rtn4Q99P72 Gm43445-201ENSMUST00000198564 2091 ntBASIC29.45■■■□□ 2.31
Rtn4Q99P72 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC29.45■■■□□ 2.31
Rtn4Q99P72 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
Rtn4Q99P72 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC29.44■■■□□ 2.3
Rtn4Q99P72 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC29.43■■■□□ 2.3
Rtn4Q99P72 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
Rtn4Q99P72 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Rtn4Q99P72 AC167019.3-201ENSMUST00000228225 1266 ntBASIC29.42■■■□□ 2.3
Rtn4Q99P72 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Rtn4Q99P72 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Rtn4Q99P72 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Rtn4Q99P72 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC29.38■■■□□ 2.29
Rtn4Q99P72 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Rtn4Q99P72 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Rtn4Q99P72 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Rtn4Q99P72 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Rtn4Q99P72 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Rtn4Q99P72 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Rtn4Q99P72 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
Rtn4Q99P72 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC29.35■■■□□ 2.29
Rtn4Q99P72 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
Rtn4Q99P72 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Rtn4Q99P72 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Rtn4Q99P72 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Rtn4Q99P72 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
Rtn4Q99P72 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
Rtn4Q99P72 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC29.29■■■□□ 2.28
Rtn4Q99P72 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC29.29■■■□□ 2.28
Rtn4Q99P72 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Rtn4Q99P72 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC29.29■■■□□ 2.28
Rtn4Q99P72 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC29.28■■■□□ 2.28
Rtn4Q99P72 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC29.28■■■□□ 2.28
Rtn4Q99P72 Mir6538-201ENSMUST00000183713 110 ntBASIC29.27■■■□□ 2.28
Rtn4Q99P72 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
Rtn4Q99P72 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC29.26■■■□□ 2.27
Rtn4Q99P72 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Rtn4Q99P72 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC29.25■■■□□ 2.27
Rtn4Q99P72 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC29.24■■■□□ 2.27
Rtn4Q99P72 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Rtn4Q99P72 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC29.24■■■□□ 2.27
Rtn4Q99P72 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Rtn4Q99P72 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC29.23■■■□□ 2.27
Rtn4Q99P72 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC29.23■■■□□ 2.27
Rtn4Q99P72 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC29.23■■■□□ 2.27
Rtn4Q99P72 Gm6206-201ENSMUST00000133472 2199 ntBASIC29.23■■■□□ 2.27
Rtn4Q99P72 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Rtn4Q99P72 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC29.21■■■□□ 2.27
Rtn4Q99P72 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Rtn4Q99P72 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC29.21■■■□□ 2.27
Rtn4Q99P72 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC29.2■■■□□ 2.27
Rtn4Q99P72 Gm9905-201ENSMUST00000065740 1845 ntBASIC29.2■■■□□ 2.27
Rtn4Q99P72 Gm20634-201ENSMUST00000090779 2956 ntBASIC29.19■■■□□ 2.26
Rtn4Q99P72 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Rtn4Q99P72 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Rtn4Q99P72 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC29.19■■■□□ 2.26
Rtn4Q99P72 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Rtn4Q99P72 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Rtn4Q99P72 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC29.18■■■□□ 2.26
Rtn4Q99P72 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Rtn4Q99P72 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Rtn4Q99P72 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Rtn4Q99P72 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC29.17■■■□□ 2.26
Rtn4Q99P72 Gm4799-201ENSMUST00000095396 657 ntBASIC29.17■■■□□ 2.26
Rtn4Q99P72 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Rtn4Q99P72 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Rtn4Q99P72 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC29.16■■■□□ 2.26
Rtn4Q99P72 Amer2-203ENSMUST00000225247 2662 ntBASIC29.15■■■□□ 2.26
Rtn4Q99P72 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms