Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
Col20a1Q923P0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Col20a1Q923P0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
Col20a1Q923P0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Col20a1Q923P0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Col20a1Q923P0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Col20a1Q923P0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
Col20a1Q923P0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
Col20a1Q923P0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC28.24■■■□□ 2.11
Col20a1Q923P0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Col20a1Q923P0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Col20a1Q923P0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Col20a1Q923P0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC28.21■■■□□ 2.11
Col20a1Q923P0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC28.2■■■□□ 2.11
Col20a1Q923P0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Col20a1Q923P0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
Col20a1Q923P0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Col20a1Q923P0 Gm6311-201ENSMUST00000073790 878 ntBASIC28.19■■■□□ 2.1
Col20a1Q923P0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
Col20a1Q923P0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC28.17■■■□□ 2.1
Col20a1Q923P0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
Col20a1Q923P0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC28.17■■■□□ 2.1
Col20a1Q923P0 Gm37136-201ENSMUST00000194368 194 ntBASIC28.17■■■□□ 2.1
Col20a1Q923P0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC28.16■■■□□ 2.1
Col20a1Q923P0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC28.16■■■□□ 2.1
Col20a1Q923P0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Col20a1Q923P0 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Col20a1Q923P0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Col20a1Q923P0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC28.14■■■□□ 2.09
Col20a1Q923P0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Col20a1Q923P0 Gm11175-201ENSMUST00000116172 543 ntBASIC28.13■■■□□ 2.09
Col20a1Q923P0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
Col20a1Q923P0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Col20a1Q923P0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC28.12■■■□□ 2.09
Col20a1Q923P0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Col20a1Q923P0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Col20a1Q923P0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
Col20a1Q923P0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Col20a1Q923P0 Mir6538-201ENSMUST00000183713 110 ntBASIC28.1■■■□□ 2.09
Col20a1Q923P0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Col20a1Q923P0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC28.09■■■□□ 2.09
Col20a1Q923P0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC28.09■■■□□ 2.09
Col20a1Q923P0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
Col20a1Q923P0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC28.08■■■□□ 2.09
Col20a1Q923P0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Col20a1Q923P0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Col20a1Q923P0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Col20a1Q923P0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Col20a1Q923P0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC28.05■■■□□ 2.08
Col20a1Q923P0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Col20a1Q923P0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC28.05■■■□□ 2.08
Col20a1Q923P0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Col20a1Q923P0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Col20a1Q923P0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Col20a1Q923P0 Gm4799-201ENSMUST00000095396 657 ntBASIC28.04■■■□□ 2.08
Col20a1Q923P0 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Col20a1Q923P0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
Col20a1Q923P0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Col20a1Q923P0 AC154454.1-201ENSMUST00000225253 216 ntBASIC28.02■■■□□ 2.08
Col20a1Q923P0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Col20a1Q923P0 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC28■■■□□ 2.07
Col20a1Q923P0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC28■■■□□ 2.07
Col20a1Q923P0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Col20a1Q923P0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC28■■■□□ 2.07
Col20a1Q923P0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC27.99■■■□□ 2.07
Col20a1Q923P0 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Col20a1Q923P0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Col20a1Q923P0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC27.98■■■□□ 2.07
Col20a1Q923P0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC27.98■■■□□ 2.07
Col20a1Q923P0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC27.97■■■□□ 2.07
Col20a1Q923P0 Mir3960-201ENSMUST00000198213 73 ntBASIC27.97■■■□□ 2.07
Col20a1Q923P0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Col20a1Q923P0 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
Col20a1Q923P0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Col20a1Q923P0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Col20a1Q923P0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
Col20a1Q923P0 Amer2-203ENSMUST00000225247 2662 ntBASIC27.94■■■□□ 2.06
Col20a1Q923P0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC27.94■■■□□ 2.06
Col20a1Q923P0 Pkd1-207ENSMUST00000228550 1050 ntBASIC27.92■■■□□ 2.06
Col20a1Q923P0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Col20a1Q923P0 Gm13889-201ENSMUST00000099689 1386 ntBASIC27.92■■■□□ 2.06
Col20a1Q923P0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC27.91■■■□□ 2.06
Col20a1Q923P0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Col20a1Q923P0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Col20a1Q923P0 Gm45364-201ENSMUST00000210883 159 ntBASIC27.9■■■□□ 2.06
Col20a1Q923P0 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Col20a1Q923P0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Col20a1Q923P0 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Col20a1Q923P0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Col20a1Q923P0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Col20a1Q923P0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC27.89■■■□□ 2.05
Col20a1Q923P0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Col20a1Q923P0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Col20a1Q923P0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Col20a1Q923P0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Col20a1Q923P0 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Col20a1Q923P0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC27.86■■■□□ 2.05
Col20a1Q923P0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC27.86■■■□□ 2.05
Col20a1Q923P0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC27.86■■■□□ 2.05
Col20a1Q923P0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms