Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Pcdha11Q91Y19 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
Pcdha11Q91Y19 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
Pcdha11Q91Y19 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
Pcdha11Q91Y19 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.91■■□□□ 1.58
Pcdha11Q91Y19 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdha11Q91Y19 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdha11Q91Y19 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdha11Q91Y19 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.89■■□□□ 1.58
Pcdha11Q91Y19 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Pcdha11Q91Y19 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
Pcdha11Q91Y19 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
Pcdha11Q91Y19 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Pcdha11Q91Y19 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Pcdha11Q91Y19 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdha11Q91Y19 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdha11Q91Y19 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdha11Q91Y19 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.85■■□□□ 1.57
Pcdha11Q91Y19 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Pcdha11Q91Y19 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Pcdha11Q91Y19 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdha11Q91Y19 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdha11Q91Y19 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.81■■□□□ 1.56
Pcdha11Q91Y19 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Pcdha11Q91Y19 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdha11Q91Y19 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdha11Q91Y19 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdha11Q91Y19 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdha11Q91Y19 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdha11Q91Y19 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC24.79■■□□□ 1.56
Pcdha11Q91Y19 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdha11Q91Y19 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdha11Q91Y19 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.75■■□□□ 1.55
Pcdha11Q91Y19 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.75■■□□□ 1.55
Pcdha11Q91Y19 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.73■■□□□ 1.55
Pcdha11Q91Y19 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdha11Q91Y19 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
Pcdha11Q91Y19 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.71■■□□□ 1.55
Pcdha11Q91Y19 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdha11Q91Y19 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Pcdha11Q91Y19 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24.69■■□□□ 1.54
Pcdha11Q91Y19 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Pcdha11Q91Y19 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Pcdha11Q91Y19 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC24.69■■□□□ 1.54
Pcdha11Q91Y19 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdha11Q91Y19 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
Pcdha11Q91Y19 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdha11Q91Y19 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
Pcdha11Q91Y19 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdha11Q91Y19 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdha11Q91Y19 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdha11Q91Y19 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdha11Q91Y19 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdha11Q91Y19 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdha11Q91Y19 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdha11Q91Y19 Gm37136-201ENSMUST00000194368 194 ntBASIC24.64■■□□□ 1.54
Pcdha11Q91Y19 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.53
Pcdha11Q91Y19 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Pcdha11Q91Y19 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdha11Q91Y19 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdha11Q91Y19 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdha11Q91Y19 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdha11Q91Y19 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdha11Q91Y19 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdha11Q91Y19 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdha11Q91Y19 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
Pcdha11Q91Y19 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdha11Q91Y19 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdha11Q91Y19 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdha11Q91Y19 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.59■■□□□ 1.53
Pcdha11Q91Y19 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC24.59■■□□□ 1.53
Pcdha11Q91Y19 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdha11Q91Y19 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdha11Q91Y19 Gm37847-201ENSMUST00000192163 1497 ntBASIC24.58■■□□□ 1.52
Pcdha11Q91Y19 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.58■■□□□ 1.52
Pcdha11Q91Y19 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdha11Q91Y19 AC167019.3-201ENSMUST00000228225 1266 ntBASIC24.56■■□□□ 1.52
Pcdha11Q91Y19 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
Pcdha11Q91Y19 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.56■■□□□ 1.52
Pcdha11Q91Y19 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdha11Q91Y19 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdha11Q91Y19 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdha11Q91Y19 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdha11Q91Y19 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Pcdha11Q91Y19 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.54■■□□□ 1.52
Pcdha11Q91Y19 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
Pcdha11Q91Y19 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
Pcdha11Q91Y19 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdha11Q91Y19 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.51■■□□□ 1.51
Pcdha11Q91Y19 Gm4799-201ENSMUST00000095396 657 ntBASIC24.51■■□□□ 1.51
Pcdha11Q91Y19 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdha11Q91Y19 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
Pcdha11Q91Y19 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Pcdha11Q91Y19 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Pcdha11Q91Y19 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdha11Q91Y19 Gm6311-201ENSMUST00000073790 878 ntBASIC24.5■■□□□ 1.51
Pcdha11Q91Y19 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdha11Q91Y19 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdha11Q91Y19 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdha11Q91Y19 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms