Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdha3Q91Y16 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.68■■□□□ 1.54
Pcdha3Q91Y16 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdha3Q91Y16 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdha3Q91Y16 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
Pcdha3Q91Y16 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdha3Q91Y16 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdha3Q91Y16 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.67■■□□□ 1.54
Pcdha3Q91Y16 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdha3Q91Y16 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC24.67■■□□□ 1.54
Pcdha3Q91Y16 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdha3Q91Y16 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC24.65■■□□□ 1.54
Pcdha3Q91Y16 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdha3Q91Y16 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdha3Q91Y16 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdha3Q91Y16 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
Pcdha3Q91Y16 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdha3Q91Y16 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdha3Q91Y16 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.61■■□□□ 1.53
Pcdha3Q91Y16 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdha3Q91Y16 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdha3Q91Y16 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdha3Q91Y16 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdha3Q91Y16 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdha3Q91Y16 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdha3Q91Y16 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdha3Q91Y16 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdha3Q91Y16 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.6■■□□□ 1.53
Pcdha3Q91Y16 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
Pcdha3Q91Y16 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdha3Q91Y16 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.6■■□□□ 1.53
Pcdha3Q91Y16 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.59■■□□□ 1.53
Pcdha3Q91Y16 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdha3Q91Y16 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdha3Q91Y16 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdha3Q91Y16 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdha3Q91Y16 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdha3Q91Y16 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
Pcdha3Q91Y16 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
Pcdha3Q91Y16 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.58■■□□□ 1.52
Pcdha3Q91Y16 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdha3Q91Y16 Gm30023-201ENSMUST00000197970 889 ntBASIC24.56■■□□□ 1.52
Pcdha3Q91Y16 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdha3Q91Y16 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.55■■□□□ 1.52
Pcdha3Q91Y16 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdha3Q91Y16 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdha3Q91Y16 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdha3Q91Y16 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Pcdha3Q91Y16 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Pcdha3Q91Y16 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Pcdha3Q91Y16 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
Pcdha3Q91Y16 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
Pcdha3Q91Y16 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.53■■□□□ 1.52
Pcdha3Q91Y16 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdha3Q91Y16 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Pcdha3Q91Y16 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.52■■□□□ 1.52
Pcdha3Q91Y16 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Pcdha3Q91Y16 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
Pcdha3Q91Y16 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.51■■□□□ 1.51
Pcdha3Q91Y16 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdha3Q91Y16 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC24.51■■□□□ 1.51
Pcdha3Q91Y16 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdha3Q91Y16 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdha3Q91Y16 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdha3Q91Y16 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdha3Q91Y16 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdha3Q91Y16 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdha3Q91Y16 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdha3Q91Y16 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC24.48■■□□□ 1.51
Pcdha3Q91Y16 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdha3Q91Y16 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdha3Q91Y16 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdha3Q91Y16 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC24.46■■□□□ 1.51
Pcdha3Q91Y16 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC24.46■■□□□ 1.51
Pcdha3Q91Y16 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.45■■□□□ 1.5
Pcdha3Q91Y16 Gm7432-201ENSMUST00000210343 879 ntBASIC24.45■■□□□ 1.5
Pcdha3Q91Y16 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.45■■□□□ 1.5
Pcdha3Q91Y16 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Pcdha3Q91Y16 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
Pcdha3Q91Y16 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdha3Q91Y16 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdha3Q91Y16 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.42■■□□□ 1.5
Pcdha3Q91Y16 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdha3Q91Y16 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdha3Q91Y16 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdha3Q91Y16 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdha3Q91Y16 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdha3Q91Y16 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdha3Q91Y16 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdha3Q91Y16 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC24.4■■□□□ 1.5
Pcdha3Q91Y16 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdha3Q91Y16 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
Pcdha3Q91Y16 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdha3Q91Y16 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Pcdha3Q91Y16 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdha3Q91Y16 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdha3Q91Y16 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Pcdha3Q91Y16 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdha3Q91Y16 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdha3Q91Y16 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms