Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhga11Q91XY8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhga11Q91XY8 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhga11Q91XY8 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhga11Q91XY8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhga11Q91XY8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.6■■□□□ 1.21
Pcdhga11Q91XY8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.6■■□□□ 1.21
Pcdhga11Q91XY8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhga11Q91XY8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.59■■□□□ 1.21
Pcdhga11Q91XY8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhga11Q91XY8 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhga11Q91XY8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Pcdhga11Q91XY8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
Pcdhga11Q91XY8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Pcdhga11Q91XY8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
Pcdhga11Q91XY8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhga11Q91XY8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdhga11Q91XY8 Gm20634-201ENSMUST00000090779 2956 ntBASIC22.56■■□□□ 1.2
Pcdhga11Q91XY8 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC22.55■■□□□ 1.2
Pcdhga11Q91XY8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhga11Q91XY8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhga11Q91XY8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhga11Q91XY8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhga11Q91XY8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhga11Q91XY8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhga11Q91XY8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhga11Q91XY8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhga11Q91XY8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.53■■□□□ 1.2
Pcdhga11Q91XY8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhga11Q91XY8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhga11Q91XY8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhga11Q91XY8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC22.52■■□□□ 1.2
Pcdhga11Q91XY8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Pcdhga11Q91XY8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhga11Q91XY8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Pcdhga11Q91XY8 Gm30023-201ENSMUST00000197970 889 ntBASIC22.5■■□□□ 1.19
Pcdhga11Q91XY8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhga11Q91XY8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhga11Q91XY8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhga11Q91XY8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhga11Q91XY8 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhga11Q91XY8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhga11Q91XY8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhga11Q91XY8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.47■■□□□ 1.19
Pcdhga11Q91XY8 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhga11Q91XY8 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhga11Q91XY8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
Pcdhga11Q91XY8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhga11Q91XY8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhga11Q91XY8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhga11Q91XY8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.47■■□□□ 1.19
Pcdhga11Q91XY8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhga11Q91XY8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhga11Q91XY8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhga11Q91XY8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Pcdhga11Q91XY8 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Pcdhga11Q91XY8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Pcdhga11Q91XY8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhga11Q91XY8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Pcdhga11Q91XY8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhga11Q91XY8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhga11Q91XY8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Pcdhga11Q91XY8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Pcdhga11Q91XY8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
Pcdhga11Q91XY8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.43■■□□□ 1.18
Pcdhga11Q91XY8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhga11Q91XY8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhga11Q91XY8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhga11Q91XY8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhga11Q91XY8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhga11Q91XY8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.41■■□□□ 1.18
Pcdhga11Q91XY8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhga11Q91XY8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhga11Q91XY8 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Pcdhga11Q91XY8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhga11Q91XY8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhga11Q91XY8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Pcdhga11Q91XY8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Pcdhga11Q91XY8 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Pcdhga11Q91XY8 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhga11Q91XY8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Pcdhga11Q91XY8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.38■■□□□ 1.17
Pcdhga11Q91XY8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.38■■□□□ 1.17
Pcdhga11Q91XY8 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhga11Q91XY8 Gm9939-201ENSMUST00000067161 1154 ntBASIC22.37■■□□□ 1.17
Pcdhga11Q91XY8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Pcdhga11Q91XY8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.36■■□□□ 1.17
Pcdhga11Q91XY8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhga11Q91XY8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhga11Q91XY8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhga11Q91XY8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhga11Q91XY8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhga11Q91XY8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
Pcdhga11Q91XY8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhga11Q91XY8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
Pcdhga11Q91XY8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Pcdhga11Q91XY8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhga11Q91XY8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhga11Q91XY8 Particl-201ENSMUST00000205370 1560 ntBASIC22.31■■□□□ 1.16
Pcdhga11Q91XY8 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.31■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms