Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
H1fooQ8VIK3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
H1fooQ8VIK3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
H1fooQ8VIK3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
H1fooQ8VIK3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
H1fooQ8VIK3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
H1fooQ8VIK3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
H1fooQ8VIK3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
H1fooQ8VIK3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
H1fooQ8VIK3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
H1fooQ8VIK3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
H1fooQ8VIK3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
H1fooQ8VIK3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
H1fooQ8VIK3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
H1fooQ8VIK3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
H1fooQ8VIK3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
H1fooQ8VIK3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
H1fooQ8VIK3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
H1fooQ8VIK3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.59■□□□□ 0.73
H1fooQ8VIK3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.59■□□□□ 0.73
H1fooQ8VIK3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
H1fooQ8VIK3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.59■□□□□ 0.73
H1fooQ8VIK3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
H1fooQ8VIK3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
H1fooQ8VIK3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.58■□□□□ 0.72
H1fooQ8VIK3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
H1fooQ8VIK3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
H1fooQ8VIK3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
H1fooQ8VIK3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
H1fooQ8VIK3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
H1fooQ8VIK3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
H1fooQ8VIK3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
H1fooQ8VIK3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
H1fooQ8VIK3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
H1fooQ8VIK3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.55■□□□□ 0.72
H1fooQ8VIK3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
H1fooQ8VIK3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
H1fooQ8VIK3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
H1fooQ8VIK3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
H1fooQ8VIK3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
H1fooQ8VIK3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.54■□□□□ 0.72
H1fooQ8VIK3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H1fooQ8VIK3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H1fooQ8VIK3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
H1fooQ8VIK3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H1fooQ8VIK3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
H1fooQ8VIK3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
H1fooQ8VIK3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
H1fooQ8VIK3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
H1fooQ8VIK3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
H1fooQ8VIK3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H1fooQ8VIK3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H1fooQ8VIK3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
H1fooQ8VIK3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H1fooQ8VIK3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.5■□□□□ 0.71
H1fooQ8VIK3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
H1fooQ8VIK3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H1fooQ8VIK3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H1fooQ8VIK3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H1fooQ8VIK3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
H1fooQ8VIK3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
H1fooQ8VIK3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
H1fooQ8VIK3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
H1fooQ8VIK3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
H1fooQ8VIK3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
H1fooQ8VIK3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.46■□□□□ 0.71
H1fooQ8VIK3 Nkain2-201ENSMUST00000092602 558 ntBASIC19.46■□□□□ 0.71
H1fooQ8VIK3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
H1fooQ8VIK3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
H1fooQ8VIK3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.46■□□□□ 0.71
H1fooQ8VIK3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
H1fooQ8VIK3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
H1fooQ8VIK3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
H1fooQ8VIK3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
H1fooQ8VIK3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
H1fooQ8VIK3 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.44■□□□□ 0.7
H1fooQ8VIK3 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.44■□□□□ 0.7
H1fooQ8VIK3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
H1fooQ8VIK3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
H1fooQ8VIK3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
H1fooQ8VIK3 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
H1fooQ8VIK3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
H1fooQ8VIK3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
H1fooQ8VIK3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
H1fooQ8VIK3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
H1fooQ8VIK3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
H1fooQ8VIK3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
H1fooQ8VIK3 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
H1fooQ8VIK3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
H1fooQ8VIK3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
H1fooQ8VIK3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
H1fooQ8VIK3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
H1fooQ8VIK3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
H1fooQ8VIK3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.4■□□□□ 0.7
H1fooQ8VIK3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.4■□□□□ 0.7
H1fooQ8VIK3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
H1fooQ8VIK3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
H1fooQ8VIK3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
H1fooQ8VIK3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
H1fooQ8VIK3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms