Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rnf8Q8VC56 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rnf8Q8VC56 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rnf8Q8VC56 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rnf8Q8VC56 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Rnf8Q8VC56 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rnf8Q8VC56 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rnf8Q8VC56 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rnf8Q8VC56 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Rnf8Q8VC56 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rnf8Q8VC56 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Rnf8Q8VC56 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rnf8Q8VC56 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Rnf8Q8VC56 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rnf8Q8VC56 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rnf8Q8VC56 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Rnf8Q8VC56 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rnf8Q8VC56 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.43■■□□□ 1.18
Rnf8Q8VC56 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Rnf8Q8VC56 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rnf8Q8VC56 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Rnf8Q8VC56 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Rnf8Q8VC56 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.42■■□□□ 1.18
Rnf8Q8VC56 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rnf8Q8VC56 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rnf8Q8VC56 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rnf8Q8VC56 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Rnf8Q8VC56 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.4■■□□□ 1.18
Rnf8Q8VC56 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.4■■□□□ 1.18
Rnf8Q8VC56 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Rnf8Q8VC56 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rnf8Q8VC56 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
Rnf8Q8VC56 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Rnf8Q8VC56 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.37■■□□□ 1.17
Rnf8Q8VC56 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Rnf8Q8VC56 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rnf8Q8VC56 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.37■■□□□ 1.17
Rnf8Q8VC56 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rnf8Q8VC56 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rnf8Q8VC56 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rnf8Q8VC56 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.36■■□□□ 1.17
Rnf8Q8VC56 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.35■■□□□ 1.17
Rnf8Q8VC56 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rnf8Q8VC56 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.35■■□□□ 1.17
Rnf8Q8VC56 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Rnf8Q8VC56 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rnf8Q8VC56 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rnf8Q8VC56 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rnf8Q8VC56 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
Rnf8Q8VC56 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rnf8Q8VC56 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Rnf8Q8VC56 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rnf8Q8VC56 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Rnf8Q8VC56 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rnf8Q8VC56 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rnf8Q8VC56 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rnf8Q8VC56 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Rnf8Q8VC56 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rnf8Q8VC56 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Rnf8Q8VC56 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Rnf8Q8VC56 Gm9939-201ENSMUST00000067161 1154 ntBASIC22.29■■□□□ 1.16
Rnf8Q8VC56 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rnf8Q8VC56 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf8Q8VC56 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf8Q8VC56 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Rnf8Q8VC56 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf8Q8VC56 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf8Q8VC56 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.27■■□□□ 1.16
Rnf8Q8VC56 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rnf8Q8VC56 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
Rnf8Q8VC56 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.27■■□□□ 1.15
Rnf8Q8VC56 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rnf8Q8VC56 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Rnf8Q8VC56 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Rnf8Q8VC56 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Rnf8Q8VC56 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rnf8Q8VC56 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Rnf8Q8VC56 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rnf8Q8VC56 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.24■■□□□ 1.15
Rnf8Q8VC56 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rnf8Q8VC56 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rnf8Q8VC56 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
Rnf8Q8VC56 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rnf8Q8VC56 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rnf8Q8VC56 Gm8503-201ENSMUST00000118131 455 ntBASIC22.22■■□□□ 1.15
Rnf8Q8VC56 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rnf8Q8VC56 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rnf8Q8VC56 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Rnf8Q8VC56 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rnf8Q8VC56 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Rnf8Q8VC56 Gm6821-201ENSMUST00000107540 542 ntBASIC22.2■■□□□ 1.14
Rnf8Q8VC56 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
Rnf8Q8VC56 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Rnf8Q8VC56 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Rnf8Q8VC56 Nkain2-201ENSMUST00000092602 558 ntBASIC22.19■■□□□ 1.14
Rnf8Q8VC56 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rnf8Q8VC56 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rnf8Q8VC56 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rnf8Q8VC56 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rnf8Q8VC56 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 126.8 ms