Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Gm5786-201ENSMUST00000085368 882 ntBASIC27.49■■□□□ 1.99
Usp33Q8R5K2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
Usp33Q8R5K2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC27.49■■□□□ 1.99
Usp33Q8R5K2 Pkd1-207ENSMUST00000228550 1050 ntBASIC27.48■■□□□ 1.99
Usp33Q8R5K2 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Usp33Q8R5K2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Usp33Q8R5K2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Usp33Q8R5K2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC27.45■■□□□ 1.98
Usp33Q8R5K2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Usp33Q8R5K2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Usp33Q8R5K2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Usp33Q8R5K2 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Usp33Q8R5K2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.43■■□□□ 1.98
Usp33Q8R5K2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC27.43■■□□□ 1.98
Usp33Q8R5K2 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC27.43■■□□□ 1.98
Usp33Q8R5K2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC27.41■■□□□ 1.98
Usp33Q8R5K2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
Usp33Q8R5K2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC27.41■■□□□ 1.98
Usp33Q8R5K2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC27.4■■□□□ 1.98
Usp33Q8R5K2 Mir3960-201ENSMUST00000198213 73 ntBASIC27.4■■□□□ 1.98
Usp33Q8R5K2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Usp33Q8R5K2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
Usp33Q8R5K2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC27.39■■□□□ 1.98
Usp33Q8R5K2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
Usp33Q8R5K2 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Usp33Q8R5K2 AC154454.1-201ENSMUST00000225253 216 ntBASIC27.38■■□□□ 1.97
Usp33Q8R5K2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Usp33Q8R5K2 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Usp33Q8R5K2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
Usp33Q8R5K2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Usp33Q8R5K2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
Usp33Q8R5K2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC27.35■■□□□ 1.97
Usp33Q8R5K2 Gm27502-201ENSMUST00000183495 199 ntBASIC27.35■■□□□ 1.97
Usp33Q8R5K2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Usp33Q8R5K2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Usp33Q8R5K2 Gm45364-201ENSMUST00000210883 159 ntBASIC27.33■■□□□ 1.97
Usp33Q8R5K2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Usp33Q8R5K2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Usp33Q8R5K2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
Usp33Q8R5K2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Usp33Q8R5K2 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Usp33Q8R5K2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Usp33Q8R5K2 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Usp33Q8R5K2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Usp33Q8R5K2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Usp33Q8R5K2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Usp33Q8R5K2 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Usp33Q8R5K2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Usp33Q8R5K2 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Usp33Q8R5K2 Gm7332-201ENSMUST00000118351 454 ntBASIC27.28■■□□□ 1.96
Usp33Q8R5K2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC27.28■■□□□ 1.96
Usp33Q8R5K2 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC27.27■■□□□ 1.96
Usp33Q8R5K2 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Usp33Q8R5K2 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Usp33Q8R5K2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Usp33Q8R5K2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Usp33Q8R5K2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Usp33Q8R5K2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC27.25■■□□□ 1.95
Usp33Q8R5K2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC27.25■■□□□ 1.95
Usp33Q8R5K2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC27.25■■□□□ 1.95
Usp33Q8R5K2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Usp33Q8R5K2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Usp33Q8R5K2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC27.24■■□□□ 1.95
Usp33Q8R5K2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
Usp33Q8R5K2 Gm9905-201ENSMUST00000065740 1845 ntBASIC27.23■■□□□ 1.95
Usp33Q8R5K2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC27.22■■□□□ 1.95
Usp33Q8R5K2 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Usp33Q8R5K2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Usp33Q8R5K2 Gm37136-201ENSMUST00000194368 194 ntBASIC27.21■■□□□ 1.95
Usp33Q8R5K2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Usp33Q8R5K2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Usp33Q8R5K2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Usp33Q8R5K2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Usp33Q8R5K2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Usp33Q8R5K2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
Usp33Q8R5K2 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Usp33Q8R5K2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Usp33Q8R5K2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Usp33Q8R5K2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC27.16■■□□□ 1.94
Usp33Q8R5K2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC27.16■■□□□ 1.94
Usp33Q8R5K2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Usp33Q8R5K2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC27.15■■□□□ 1.94
Usp33Q8R5K2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC27.15■■□□□ 1.94
Usp33Q8R5K2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Usp33Q8R5K2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Usp33Q8R5K2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Usp33Q8R5K2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Usp33Q8R5K2 Gm13889-201ENSMUST00000099689 1386 ntBASIC27.13■■□□□ 1.93
Usp33Q8R5K2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Usp33Q8R5K2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Usp33Q8R5K2 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Usp33Q8R5K2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Usp33Q8R5K2 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Usp33Q8R5K2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Usp33Q8R5K2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC27.1■■□□□ 1.93
Usp33Q8R5K2 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC27.1■■□□□ 1.93
Usp33Q8R5K2 Gm12818-201ENSMUST00000117562 1349 ntBASIC27.1■■□□□ 1.93
Usp33Q8R5K2 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Usp33Q8R5K2 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC27.09■■□□□ 1.93
Usp33Q8R5K2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms