Protein–RNA interactions for Protein: Q8R1S4

Mtss1, Metastasis suppressor protein 1, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mtss1Q8R1S4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Mtss1Q8R1S4 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
Mtss1Q8R1S4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.45■■□□□ 1.5
Mtss1Q8R1S4 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Mtss1Q8R1S4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.45■■□□□ 1.5
Mtss1Q8R1S4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Mtss1Q8R1S4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.44■■□□□ 1.5
Mtss1Q8R1S4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Mtss1Q8R1S4 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.44■■□□□ 1.5
Mtss1Q8R1S4 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24.43■■□□□ 1.5
Mtss1Q8R1S4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
Mtss1Q8R1S4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Mtss1Q8R1S4 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24.42■■□□□ 1.5
Mtss1Q8R1S4 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Mtss1Q8R1S4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Mtss1Q8R1S4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Mtss1Q8R1S4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Mtss1Q8R1S4 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
Mtss1Q8R1S4 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Mtss1Q8R1S4 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.4■■□□□ 1.5
Mtss1Q8R1S4 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Mtss1Q8R1S4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Mtss1Q8R1S4 Nkain2-201ENSMUST00000092602 558 ntBASIC24.39■■□□□ 1.49
Mtss1Q8R1S4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Mtss1Q8R1S4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Mtss1Q8R1S4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Mtss1Q8R1S4 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.37■■□□□ 1.49
Mtss1Q8R1S4 Particl-201ENSMUST00000205370 1560 ntBASIC24.37■■□□□ 1.49
Mtss1Q8R1S4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
Mtss1Q8R1S4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Mtss1Q8R1S4 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.36■■□□□ 1.49
Mtss1Q8R1S4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Mtss1Q8R1S4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Mtss1Q8R1S4 Gm37847-201ENSMUST00000192163 1497 ntBASIC24.35■■□□□ 1.49
Mtss1Q8R1S4 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.35■■□□□ 1.49
Mtss1Q8R1S4 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Mtss1Q8R1S4 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Mtss1Q8R1S4 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Mtss1Q8R1S4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Mtss1Q8R1S4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.33■■□□□ 1.49
Mtss1Q8R1S4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Mtss1Q8R1S4 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Mtss1Q8R1S4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Mtss1Q8R1S4 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
Mtss1Q8R1S4 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
Mtss1Q8R1S4 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Mtss1Q8R1S4 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.32■■□□□ 1.48
Mtss1Q8R1S4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Mtss1Q8R1S4 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24.31■■□□□ 1.48
Mtss1Q8R1S4 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
Mtss1Q8R1S4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
Mtss1Q8R1S4 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.31■■□□□ 1.48
Mtss1Q8R1S4 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.31■■□□□ 1.48
Mtss1Q8R1S4 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Mtss1Q8R1S4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Mtss1Q8R1S4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC24.3■■□□□ 1.48
Mtss1Q8R1S4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC24.29■■□□□ 1.48
Mtss1Q8R1S4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Mtss1Q8R1S4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.29■■□□□ 1.48
Mtss1Q8R1S4 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.28■■□□□ 1.48
Mtss1Q8R1S4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Mtss1Q8R1S4 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Mtss1Q8R1S4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Mtss1Q8R1S4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.27■■□□□ 1.48
Mtss1Q8R1S4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
Mtss1Q8R1S4 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Mtss1Q8R1S4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Mtss1Q8R1S4 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Mtss1Q8R1S4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Mtss1Q8R1S4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Mtss1Q8R1S4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Mtss1Q8R1S4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.25■■□□□ 1.47
Mtss1Q8R1S4 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Mtss1Q8R1S4 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Mtss1Q8R1S4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.24■■□□□ 1.47
Mtss1Q8R1S4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Mtss1Q8R1S4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24.24■■□□□ 1.47
Mtss1Q8R1S4 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Mtss1Q8R1S4 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Mtss1Q8R1S4 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Mtss1Q8R1S4 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Mtss1Q8R1S4 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
Mtss1Q8R1S4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.2■■□□□ 1.47
Mtss1Q8R1S4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.2■■□□□ 1.46
Mtss1Q8R1S4 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Mtss1Q8R1S4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Mtss1Q8R1S4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Mtss1Q8R1S4 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Mtss1Q8R1S4 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Mtss1Q8R1S4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Mtss1Q8R1S4 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.18■■□□□ 1.46
Mtss1Q8R1S4 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Mtss1Q8R1S4 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.16■■□□□ 1.46
Mtss1Q8R1S4 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
Mtss1Q8R1S4 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Mtss1Q8R1S4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Mtss1Q8R1S4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Mtss1Q8R1S4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
Mtss1Q8R1S4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC24.14■■□□□ 1.46
Mtss1Q8R1S4 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms