Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.72■■□□□ 1.07
H2afjQ8R1M2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
H2afjQ8R1M2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
H2afjQ8R1M2 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
H2afjQ8R1M2 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
H2afjQ8R1M2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
H2afjQ8R1M2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
H2afjQ8R1M2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
H2afjQ8R1M2 Gm45855-201ENSMUST00000212546 880 ntBASIC21.7■■□□□ 1.06
H2afjQ8R1M2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
H2afjQ8R1M2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
H2afjQ8R1M2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
H2afjQ8R1M2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
H2afjQ8R1M2 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
H2afjQ8R1M2 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
H2afjQ8R1M2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
H2afjQ8R1M2 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
H2afjQ8R1M2 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
H2afjQ8R1M2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
H2afjQ8R1M2 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
H2afjQ8R1M2 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
H2afjQ8R1M2 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
H2afjQ8R1M2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.65■■□□□ 1.06
H2afjQ8R1M2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
H2afjQ8R1M2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
H2afjQ8R1M2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
H2afjQ8R1M2 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
H2afjQ8R1M2 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.63■■□□□ 1.05
H2afjQ8R1M2 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.63■■□□□ 1.05
H2afjQ8R1M2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.62■■□□□ 1.05
H2afjQ8R1M2 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
H2afjQ8R1M2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
H2afjQ8R1M2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
H2afjQ8R1M2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
H2afjQ8R1M2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
H2afjQ8R1M2 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
H2afjQ8R1M2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
H2afjQ8R1M2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
H2afjQ8R1M2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.59■■□□□ 1.05
H2afjQ8R1M2 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
H2afjQ8R1M2 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
H2afjQ8R1M2 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
H2afjQ8R1M2 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
H2afjQ8R1M2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
H2afjQ8R1M2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
H2afjQ8R1M2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
H2afjQ8R1M2 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
H2afjQ8R1M2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.57■■□□□ 1.04
H2afjQ8R1M2 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
H2afjQ8R1M2 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
H2afjQ8R1M2 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
H2afjQ8R1M2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
H2afjQ8R1M2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
H2afjQ8R1M2 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
H2afjQ8R1M2 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
H2afjQ8R1M2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
H2afjQ8R1M2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
H2afjQ8R1M2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
H2afjQ8R1M2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
H2afjQ8R1M2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
H2afjQ8R1M2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
H2afjQ8R1M2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
H2afjQ8R1M2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
H2afjQ8R1M2 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.03
H2afjQ8R1M2 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
H2afjQ8R1M2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
H2afjQ8R1M2 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
H2afjQ8R1M2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
H2afjQ8R1M2 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.51■■□□□ 1.03
H2afjQ8R1M2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
H2afjQ8R1M2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
H2afjQ8R1M2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
H2afjQ8R1M2 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
H2afjQ8R1M2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
H2afjQ8R1M2 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.48■■□□□ 1.03
H2afjQ8R1M2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
H2afjQ8R1M2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
H2afjQ8R1M2 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
H2afjQ8R1M2 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
H2afjQ8R1M2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
H2afjQ8R1M2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
H2afjQ8R1M2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
H2afjQ8R1M2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
H2afjQ8R1M2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
H2afjQ8R1M2 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
H2afjQ8R1M2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
H2afjQ8R1M2 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
H2afjQ8R1M2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
H2afjQ8R1M2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
H2afjQ8R1M2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
H2afjQ8R1M2 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
H2afjQ8R1M2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
H2afjQ8R1M2 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
H2afjQ8R1M2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
H2afjQ8R1M2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
H2afjQ8R1M2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
H2afjQ8R1M2 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.43■■□□□ 1.02
H2afjQ8R1M2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
H2afjQ8R1M2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
H2afjQ8R1M2 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms