Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
Rpp40Q8R1F9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Rpp40Q8R1F9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC25.55■■□□□ 1.68
Rpp40Q8R1F9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Rpp40Q8R1F9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Rpp40Q8R1F9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Rpp40Q8R1F9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Rpp40Q8R1F9 Particl-201ENSMUST00000205370 1560 ntBASIC25.52■■□□□ 1.68
Rpp40Q8R1F9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC25.51■■□□□ 1.67
Rpp40Q8R1F9 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Rpp40Q8R1F9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Rpp40Q8R1F9 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC25.49■■□□□ 1.67
Rpp40Q8R1F9 Gm11599-201ENSMUST00000118720 878 ntBASIC25.48■■□□□ 1.67
Rpp40Q8R1F9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC25.47■■□□□ 1.67
Rpp40Q8R1F9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Rpp40Q8R1F9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Rpp40Q8R1F9 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Rpp40Q8R1F9 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC25.46■■□□□ 1.67
Rpp40Q8R1F9 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
Rpp40Q8R1F9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Rpp40Q8R1F9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Rpp40Q8R1F9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Rpp40Q8R1F9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rpp40Q8R1F9 Gm5987-201ENSMUST00000196433 1151 ntBASIC25.43■■□□□ 1.66
Rpp40Q8R1F9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.42■■□□□ 1.66
Rpp40Q8R1F9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rpp40Q8R1F9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Rpp40Q8R1F9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Rpp40Q8R1F9 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Rpp40Q8R1F9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Rpp40Q8R1F9 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
Rpp40Q8R1F9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Rpp40Q8R1F9 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
Rpp40Q8R1F9 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rpp40Q8R1F9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Rpp40Q8R1F9 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Rpp40Q8R1F9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC25.35■■□□□ 1.65
Rpp40Q8R1F9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Rpp40Q8R1F9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Rpp40Q8R1F9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Rpp40Q8R1F9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Rpp40Q8R1F9 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC25.33■■□□□ 1.65
Rpp40Q8R1F9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Rpp40Q8R1F9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC25.33■■□□□ 1.64
Rpp40Q8R1F9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rpp40Q8R1F9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
Rpp40Q8R1F9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rpp40Q8R1F9 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rpp40Q8R1F9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rpp40Q8R1F9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rpp40Q8R1F9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
Rpp40Q8R1F9 Gm37136-201ENSMUST00000194368 194 ntBASIC25.3■■□□□ 1.64
Rpp40Q8R1F9 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Rpp40Q8R1F9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rpp40Q8R1F9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
Rpp40Q8R1F9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Rpp40Q8R1F9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC25.28■■□□□ 1.64
Rpp40Q8R1F9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC25.27■■□□□ 1.64
Rpp40Q8R1F9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
Rpp40Q8R1F9 Gm37847-201ENSMUST00000192163 1497 ntBASIC25.26■■□□□ 1.63
Rpp40Q8R1F9 Gm31748-201ENSMUST00000194938 1497 ntBASIC25.26■■□□□ 1.63
Rpp40Q8R1F9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Rpp40Q8R1F9 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Rpp40Q8R1F9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Rpp40Q8R1F9 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Rpp40Q8R1F9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Rpp40Q8R1F9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Rpp40Q8R1F9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
Rpp40Q8R1F9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Rpp40Q8R1F9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
Rpp40Q8R1F9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Rpp40Q8R1F9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Rpp40Q8R1F9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Rpp40Q8R1F9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Rpp40Q8R1F9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Rpp40Q8R1F9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Rpp40Q8R1F9 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
Rpp40Q8R1F9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
Rpp40Q8R1F9 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rpp40Q8R1F9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rpp40Q8R1F9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC25.21■■□□□ 1.63
Rpp40Q8R1F9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rpp40Q8R1F9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Rpp40Q8R1F9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Rpp40Q8R1F9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Rpp40Q8R1F9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
Rpp40Q8R1F9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Rpp40Q8R1F9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Rpp40Q8R1F9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Rpp40Q8R1F9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Rpp40Q8R1F9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Rpp40Q8R1F9 Gm14121-201ENSMUST00000121441 1380 ntBASIC25.14■■□□□ 1.61
Rpp40Q8R1F9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Rpp40Q8R1F9 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
Rpp40Q8R1F9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
Rpp40Q8R1F9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC25.13■■□□□ 1.61
Rpp40Q8R1F9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC25.13■■□□□ 1.61
Rpp40Q8R1F9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Rpp40Q8R1F9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
Rpp40Q8R1F9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms