Protein–RNA interactions for Protein: Q8K4Q6

Neil1, Endonuclease 8-like 1, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Neil1Q8K4Q6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Neil1Q8K4Q6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Neil1Q8K4Q6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Neil1Q8K4Q6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Neil1Q8K4Q6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Neil1Q8K4Q6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Neil1Q8K4Q6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Neil1Q8K4Q6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.34■□□□□ 0.85
Neil1Q8K4Q6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Neil1Q8K4Q6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Neil1Q8K4Q6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Neil1Q8K4Q6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
Neil1Q8K4Q6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Neil1Q8K4Q6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Neil1Q8K4Q6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Neil1Q8K4Q6 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Neil1Q8K4Q6 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Neil1Q8K4Q6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Neil1Q8K4Q6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.33■□□□□ 0.85
Neil1Q8K4Q6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Neil1Q8K4Q6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Neil1Q8K4Q6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Neil1Q8K4Q6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Neil1Q8K4Q6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Neil1Q8K4Q6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Neil1Q8K4Q6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Neil1Q8K4Q6 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Neil1Q8K4Q6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Neil1Q8K4Q6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Neil1Q8K4Q6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Neil1Q8K4Q6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Neil1Q8K4Q6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Neil1Q8K4Q6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Neil1Q8K4Q6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.3■□□□□ 0.84
Neil1Q8K4Q6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Neil1Q8K4Q6 Gm24970-201ENSMUST00000175582 82 ntBASIC20.3■□□□□ 0.84
Neil1Q8K4Q6 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Neil1Q8K4Q6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Neil1Q8K4Q6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Neil1Q8K4Q6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.29■□□□□ 0.84
Neil1Q8K4Q6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Neil1Q8K4Q6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Neil1Q8K4Q6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Neil1Q8K4Q6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Neil1Q8K4Q6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Neil1Q8K4Q6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Neil1Q8K4Q6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Neil1Q8K4Q6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Neil1Q8K4Q6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Neil1Q8K4Q6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Neil1Q8K4Q6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Neil1Q8K4Q6 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Neil1Q8K4Q6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.24■□□□□ 0.83
Neil1Q8K4Q6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Neil1Q8K4Q6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Neil1Q8K4Q6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Neil1Q8K4Q6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Neil1Q8K4Q6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Neil1Q8K4Q6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Neil1Q8K4Q6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.22■□□□□ 0.83
Neil1Q8K4Q6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Neil1Q8K4Q6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Neil1Q8K4Q6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Neil1Q8K4Q6 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Neil1Q8K4Q6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Neil1Q8K4Q6 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Neil1Q8K4Q6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Neil1Q8K4Q6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Neil1Q8K4Q6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Neil1Q8K4Q6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Neil1Q8K4Q6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Neil1Q8K4Q6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Neil1Q8K4Q6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Neil1Q8K4Q6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Neil1Q8K4Q6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Neil1Q8K4Q6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Neil1Q8K4Q6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Neil1Q8K4Q6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.19■□□□□ 0.82
Neil1Q8K4Q6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Neil1Q8K4Q6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Neil1Q8K4Q6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Neil1Q8K4Q6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Neil1Q8K4Q6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Neil1Q8K4Q6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Neil1Q8K4Q6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Neil1Q8K4Q6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Neil1Q8K4Q6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Neil1Q8K4Q6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Neil1Q8K4Q6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Neil1Q8K4Q6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Neil1Q8K4Q6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Neil1Q8K4Q6 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.17■□□□□ 0.82
Neil1Q8K4Q6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Neil1Q8K4Q6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Neil1Q8K4Q6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Neil1Q8K4Q6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Neil1Q8K4Q6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Neil1Q8K4Q6 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Neil1Q8K4Q6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Neil1Q8K4Q6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms