Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm45364-201ENSMUST00000210883 159 ntBASIC32.05■■■□□ 2.72
Ddx54Q8K4L0 Gm5812-201ENSMUST00000061073 957 ntBASIC32.04■■■□□ 2.72
Ddx54Q8K4L0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Ddx54Q8K4L0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Ddx54Q8K4L0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
Ddx54Q8K4L0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Ddx54Q8K4L0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC32.03■■■□□ 2.72
Ddx54Q8K4L0 Gm14523-201ENSMUST00000117260 558 ntBASIC32.01■■■□□ 2.71
Ddx54Q8K4L0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
Ddx54Q8K4L0 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
Ddx54Q8K4L0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC32■■■□□ 2.71
Ddx54Q8K4L0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Ddx54Q8K4L0 Pcf11-205ENSMUST00000208255 1720 ntBASIC32■■■□□ 2.71
Ddx54Q8K4L0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
Ddx54Q8K4L0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Ddx54Q8K4L0 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Ddx54Q8K4L0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Ddx54Q8K4L0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Ddx54Q8K4L0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Ddx54Q8K4L0 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Ddx54Q8K4L0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC31.96■■■□□ 2.71
Ddx54Q8K4L0 Gm5067-201ENSMUST00000170449 1009 ntBASIC31.96■■■□□ 2.71
Ddx54Q8K4L0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC31.96■■■□□ 2.71
Ddx54Q8K4L0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Ddx54Q8K4L0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
Ddx54Q8K4L0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Ddx54Q8K4L0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Ddx54Q8K4L0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Ddx54Q8K4L0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
Ddx54Q8K4L0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
Ddx54Q8K4L0 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
Ddx54Q8K4L0 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC31.88■■■□□ 2.69
Ddx54Q8K4L0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Ddx54Q8K4L0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Ddx54Q8K4L0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC31.87■■■□□ 2.69
Ddx54Q8K4L0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC31.87■■■□□ 2.69
Ddx54Q8K4L0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
Ddx54Q8K4L0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC31.87■■■□□ 2.69
Ddx54Q8K4L0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC31.86■■■□□ 2.69
Ddx54Q8K4L0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
Ddx54Q8K4L0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC31.86■■■□□ 2.69
Ddx54Q8K4L0 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Ddx54Q8K4L0 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC31.84■■■□□ 2.69
Ddx54Q8K4L0 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC31.83■■■□□ 2.69
Ddx54Q8K4L0 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
Ddx54Q8K4L0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Ddx54Q8K4L0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Ddx54Q8K4L0 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Ddx54Q8K4L0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC31.81■■■□□ 2.68
Ddx54Q8K4L0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Ddx54Q8K4L0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Ddx54Q8K4L0 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Ddx54Q8K4L0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Ddx54Q8K4L0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
Ddx54Q8K4L0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Ddx54Q8K4L0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC31.78■■■□□ 2.68
Ddx54Q8K4L0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Ddx54Q8K4L0 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC31.78■■■□□ 2.68
Ddx54Q8K4L0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
Ddx54Q8K4L0 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC31.77■■■□□ 2.68
Ddx54Q8K4L0 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Ddx54Q8K4L0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.76■■■□□ 2.67
Ddx54Q8K4L0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Ddx54Q8K4L0 Gm15546-201ENSMUST00000122095 826 ntBASIC31.75■■■□□ 2.67
Ddx54Q8K4L0 Gm5921-201ENSMUST00000075898 882 ntBASIC31.75■■■□□ 2.67
Ddx54Q8K4L0 Gm12818-201ENSMUST00000117562 1349 ntBASIC31.73■■■□□ 2.67
Ddx54Q8K4L0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC31.72■■■□□ 2.67
Ddx54Q8K4L0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC31.72■■■□□ 2.67
Ddx54Q8K4L0 Gm10420-201ENSMUST00000121713 882 ntBASIC31.71■■■□□ 2.67
Ddx54Q8K4L0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Ddx54Q8K4L0 Gm13889-201ENSMUST00000099689 1386 ntBASIC31.7■■■□□ 2.67
Ddx54Q8K4L0 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Ddx54Q8K4L0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
Ddx54Q8K4L0 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Ddx54Q8K4L0 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
Ddx54Q8K4L0 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Ddx54Q8K4L0 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Ddx54Q8K4L0 Gm9910-201ENSMUST00000195385 1550 ntBASIC31.67■■■□□ 2.66
Ddx54Q8K4L0 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC31.66■■■□□ 2.66
Ddx54Q8K4L0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC31.66■■■□□ 2.66
Ddx54Q8K4L0 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC31.66■■■□□ 2.66
Ddx54Q8K4L0 AC151971.4-201ENSMUST00000214717 704 ntBASIC31.66■■■□□ 2.66
Ddx54Q8K4L0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Ddx54Q8K4L0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
Ddx54Q8K4L0 Gm37136-201ENSMUST00000194368 194 ntBASIC31.65■■■□□ 2.66
Ddx54Q8K4L0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Ddx54Q8K4L0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC31.64■■■□□ 2.66
Ddx54Q8K4L0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Ddx54Q8K4L0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC31.63■■■□□ 2.65
Ddx54Q8K4L0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC31.63■■■□□ 2.65
Ddx54Q8K4L0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC31.62■■■□□ 2.65
Ddx54Q8K4L0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Ddx54Q8K4L0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Ddx54Q8K4L0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Ddx54Q8K4L0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
Ddx54Q8K4L0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC31.6■■■□□ 2.65
Ddx54Q8K4L0 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Ddx54Q8K4L0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
Ddx54Q8K4L0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Ddx54Q8K4L0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC31.59■■■□□ 2.65
Retrieved 100 of 76,532 protein–RNA pairs in 143.2 ms