Protein–RNA interactions for Protein: Q8K3Y3

Lin28a, Protein lin-28 homolog A, mousemouse

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28aQ8K3Y3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
Lin28aQ8K3Y3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lin28aQ8K3Y3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lin28aQ8K3Y3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Lin28aQ8K3Y3 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Lin28aQ8K3Y3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Lin28aQ8K3Y3 Particl-201ENSMUST00000205370 1560 ntBASIC22.07■■□□□ 1.12
Lin28aQ8K3Y3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Lin28aQ8K3Y3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Lin28aQ8K3Y3 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.06■■□□□ 1.12
Lin28aQ8K3Y3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Lin28aQ8K3Y3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Lin28aQ8K3Y3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.05■■□□□ 1.12
Lin28aQ8K3Y3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Lin28aQ8K3Y3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Lin28aQ8K3Y3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Lin28aQ8K3Y3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Lin28aQ8K3Y3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
Lin28aQ8K3Y3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Lin28aQ8K3Y3 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Lin28aQ8K3Y3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Lin28aQ8K3Y3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.11
Lin28aQ8K3Y3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
Lin28aQ8K3Y3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.01■■□□□ 1.11
Lin28aQ8K3Y3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Lin28aQ8K3Y3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Lin28aQ8K3Y3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.99■■□□□ 1.11
Lin28aQ8K3Y3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Lin28aQ8K3Y3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.98■■□□□ 1.11
Lin28aQ8K3Y3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Lin28aQ8K3Y3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Lin28aQ8K3Y3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Lin28aQ8K3Y3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Lin28aQ8K3Y3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.95■■□□□ 1.1
Lin28aQ8K3Y3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Lin28aQ8K3Y3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Lin28aQ8K3Y3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Lin28aQ8K3Y3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Lin28aQ8K3Y3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Lin28aQ8K3Y3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Lin28aQ8K3Y3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Lin28aQ8K3Y3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Lin28aQ8K3Y3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Lin28aQ8K3Y3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Lin28aQ8K3Y3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Lin28aQ8K3Y3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Lin28aQ8K3Y3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lin28aQ8K3Y3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lin28aQ8K3Y3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Lin28aQ8K3Y3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Lin28aQ8K3Y3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Lin28aQ8K3Y3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lin28aQ8K3Y3 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lin28aQ8K3Y3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.87■■□□□ 1.09
Lin28aQ8K3Y3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Lin28aQ8K3Y3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lin28aQ8K3Y3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Lin28aQ8K3Y3 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.86■■□□□ 1.09
Lin28aQ8K3Y3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lin28aQ8K3Y3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.85■■□□□ 1.09
Lin28aQ8K3Y3 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.85■■□□□ 1.09
Lin28aQ8K3Y3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lin28aQ8K3Y3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.84■■□□□ 1.09
Lin28aQ8K3Y3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Lin28aQ8K3Y3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lin28aQ8K3Y3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.83■■□□□ 1.09
Lin28aQ8K3Y3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lin28aQ8K3Y3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.82■■□□□ 1.08
Lin28aQ8K3Y3 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.82■■□□□ 1.08
Lin28aQ8K3Y3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lin28aQ8K3Y3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lin28aQ8K3Y3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Lin28aQ8K3Y3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Lin28aQ8K3Y3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Lin28aQ8K3Y3 Gm37136-201ENSMUST00000194368 194 ntBASIC21.8■■□□□ 1.08
Lin28aQ8K3Y3 Gm6311-201ENSMUST00000073790 878 ntBASIC21.8■■□□□ 1.08
Lin28aQ8K3Y3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lin28aQ8K3Y3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lin28aQ8K3Y3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Lin28aQ8K3Y3 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Lin28aQ8K3Y3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lin28aQ8K3Y3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lin28aQ8K3Y3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lin28aQ8K3Y3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Lin28aQ8K3Y3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Lin28aQ8K3Y3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Lin28aQ8K3Y3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.76■■□□□ 1.07
Lin28aQ8K3Y3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lin28aQ8K3Y3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Lin28aQ8K3Y3 Gm4799-201ENSMUST00000095396 657 ntBASIC21.75■■□□□ 1.07
Lin28aQ8K3Y3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.75■■□□□ 1.07
Lin28aQ8K3Y3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lin28aQ8K3Y3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.75■■□□□ 1.07
Lin28aQ8K3Y3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Lin28aQ8K3Y3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Lin28aQ8K3Y3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lin28aQ8K3Y3 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.73■■□□□ 1.07
Lin28aQ8K3Y3 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.73■■□□□ 1.07
Lin28aQ8K3Y3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Lin28aQ8K3Y3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms