Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Gm45364-201ENSMUST00000210883 159 ntBASIC23.94■■□□□ 1.42
Zc3h3Q8CHP0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Zc3h3Q8CHP0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Zc3h3Q8CHP0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Zc3h3Q8CHP0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Zc3h3Q8CHP0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Zc3h3Q8CHP0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Zc3h3Q8CHP0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Zc3h3Q8CHP0 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.89■■□□□ 1.42
Zc3h3Q8CHP0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Zc3h3Q8CHP0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC23.88■■□□□ 1.41
Zc3h3Q8CHP0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.88■■□□□ 1.41
Zc3h3Q8CHP0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Zc3h3Q8CHP0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
Zc3h3Q8CHP0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.87■■□□□ 1.41
Zc3h3Q8CHP0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
Zc3h3Q8CHP0 Gm15546-201ENSMUST00000122095 826 ntBASIC23.86■■□□□ 1.41
Zc3h3Q8CHP0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Zc3h3Q8CHP0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
Zc3h3Q8CHP0 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC23.84■■□□□ 1.41
Zc3h3Q8CHP0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Zc3h3Q8CHP0 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.84■■□□□ 1.41
Zc3h3Q8CHP0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Zc3h3Q8CHP0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Zc3h3Q8CHP0 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Zc3h3Q8CHP0 Gm5921-201ENSMUST00000075898 882 ntBASIC23.83■■□□□ 1.41
Zc3h3Q8CHP0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Zc3h3Q8CHP0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Zc3h3Q8CHP0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.82■■□□□ 1.4
Zc3h3Q8CHP0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Zc3h3Q8CHP0 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Zc3h3Q8CHP0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Zc3h3Q8CHP0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Zc3h3Q8CHP0 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Zc3h3Q8CHP0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Zc3h3Q8CHP0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Zc3h3Q8CHP0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Zc3h3Q8CHP0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC23.8■■□□□ 1.4
Zc3h3Q8CHP0 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Zc3h3Q8CHP0 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Zc3h3Q8CHP0 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Zc3h3Q8CHP0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC23.78■■□□□ 1.4
Zc3h3Q8CHP0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Zc3h3Q8CHP0 Gm10420-201ENSMUST00000121713 882 ntBASIC23.76■■□□□ 1.39
Zc3h3Q8CHP0 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Zc3h3Q8CHP0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Zc3h3Q8CHP0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC23.76■■□□□ 1.39
Zc3h3Q8CHP0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Zc3h3Q8CHP0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Zc3h3Q8CHP0 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC23.75■■□□□ 1.39
Zc3h3Q8CHP0 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Zc3h3Q8CHP0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
Zc3h3Q8CHP0 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Zc3h3Q8CHP0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.74■■□□□ 1.39
Zc3h3Q8CHP0 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Zc3h3Q8CHP0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Zc3h3Q8CHP0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Zc3h3Q8CHP0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Zc3h3Q8CHP0 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Zc3h3Q8CHP0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Zc3h3Q8CHP0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC23.72■■□□□ 1.39
Zc3h3Q8CHP0 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.72■■□□□ 1.39
Zc3h3Q8CHP0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Zc3h3Q8CHP0 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.71■■□□□ 1.39
Zc3h3Q8CHP0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Zc3h3Q8CHP0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Zc3h3Q8CHP0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Zc3h3Q8CHP0 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Zc3h3Q8CHP0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Zc3h3Q8CHP0 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Zc3h3Q8CHP0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Zc3h3Q8CHP0 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Zc3h3Q8CHP0 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.69■■□□□ 1.38
Zc3h3Q8CHP0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.69■■□□□ 1.38
Zc3h3Q8CHP0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Zc3h3Q8CHP0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Zc3h3Q8CHP0 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Zc3h3Q8CHP0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Zc3h3Q8CHP0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.68■■□□□ 1.38
Zc3h3Q8CHP0 Gm5522-201ENSMUST00000189483 1242 ntBASIC23.68■■□□□ 1.38
Zc3h3Q8CHP0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Zc3h3Q8CHP0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Zc3h3Q8CHP0 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.67■■□□□ 1.38
Zc3h3Q8CHP0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC23.67■■□□□ 1.38
Zc3h3Q8CHP0 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Zc3h3Q8CHP0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.66■■□□□ 1.38
Zc3h3Q8CHP0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC23.66■■□□□ 1.38
Zc3h3Q8CHP0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Zc3h3Q8CHP0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Zc3h3Q8CHP0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Zc3h3Q8CHP0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
Zc3h3Q8CHP0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
Zc3h3Q8CHP0 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Zc3h3Q8CHP0 AC093043.1-201ENSMUST00000226700 898 ntBASIC23.63■■□□□ 1.37
Zc3h3Q8CHP0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Zc3h3Q8CHP0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Zc3h3Q8CHP0 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.62■■□□□ 1.37
Zc3h3Q8CHP0 Gm37136-201ENSMUST00000194368 194 ntBASIC23.62■■□□□ 1.37
Zc3h3Q8CHP0 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.62■■□□□ 1.37
Zc3h3Q8CHP0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.62■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms