Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Slc46a2Q8CA03 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Slc46a2Q8CA03 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Slc46a2Q8CA03 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Slc46a2Q8CA03 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Slc46a2Q8CA03 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Slc46a2Q8CA03 Gm16148-201ENSMUST00000119653 893 ntBASIC22.65■■□□□ 1.22
Slc46a2Q8CA03 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.65■■□□□ 1.22
Slc46a2Q8CA03 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Slc46a2Q8CA03 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Slc46a2Q8CA03 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.22
Slc46a2Q8CA03 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Slc46a2Q8CA03 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Slc46a2Q8CA03 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Slc46a2Q8CA03 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Slc46a2Q8CA03 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Slc46a2Q8CA03 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC22.63■■□□□ 1.21
Slc46a2Q8CA03 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Slc46a2Q8CA03 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Slc46a2Q8CA03 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Slc46a2Q8CA03 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Slc46a2Q8CA03 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.6■■□□□ 1.21
Slc46a2Q8CA03 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Slc46a2Q8CA03 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Slc46a2Q8CA03 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Slc46a2Q8CA03 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Slc46a2Q8CA03 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Slc46a2Q8CA03 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Slc46a2Q8CA03 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Slc46a2Q8CA03 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Slc46a2Q8CA03 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Slc46a2Q8CA03 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Slc46a2Q8CA03 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.57■■□□□ 1.2
Slc46a2Q8CA03 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Slc46a2Q8CA03 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Slc46a2Q8CA03 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Slc46a2Q8CA03 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Slc46a2Q8CA03 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Slc46a2Q8CA03 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Slc46a2Q8CA03 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Slc46a2Q8CA03 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Slc46a2Q8CA03 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Slc46a2Q8CA03 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Slc46a2Q8CA03 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Slc46a2Q8CA03 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Slc46a2Q8CA03 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Slc46a2Q8CA03 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.53■■□□□ 1.2
Slc46a2Q8CA03 Zfp131-205ENSMUST00000223812 663 ntBASIC22.53■■□□□ 1.2
Slc46a2Q8CA03 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Slc46a2Q8CA03 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Slc46a2Q8CA03 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Slc46a2Q8CA03 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Slc46a2Q8CA03 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Slc46a2Q8CA03 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Slc46a2Q8CA03 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Slc46a2Q8CA03 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.48■■□□□ 1.19
Slc46a2Q8CA03 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Slc46a2Q8CA03 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Slc46a2Q8CA03 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Slc46a2Q8CA03 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Slc46a2Q8CA03 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Slc46a2Q8CA03 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Slc46a2Q8CA03 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Slc46a2Q8CA03 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Slc46a2Q8CA03 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.19
Slc46a2Q8CA03 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Slc46a2Q8CA03 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Slc46a2Q8CA03 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Slc46a2Q8CA03 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Slc46a2Q8CA03 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Slc46a2Q8CA03 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Slc46a2Q8CA03 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Slc46a2Q8CA03 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Slc46a2Q8CA03 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Slc46a2Q8CA03 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
Slc46a2Q8CA03 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.42■■□□□ 1.18
Slc46a2Q8CA03 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.42■■□□□ 1.18
Slc46a2Q8CA03 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Slc46a2Q8CA03 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC22.4■■□□□ 1.18
Slc46a2Q8CA03 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.4■■□□□ 1.18
Slc46a2Q8CA03 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Slc46a2Q8CA03 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Slc46a2Q8CA03 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
Slc46a2Q8CA03 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Slc46a2Q8CA03 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Slc46a2Q8CA03 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Slc46a2Q8CA03 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Slc46a2Q8CA03 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Slc46a2Q8CA03 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Slc46a2Q8CA03 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Slc46a2Q8CA03 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Slc46a2Q8CA03 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Slc46a2Q8CA03 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Slc46a2Q8CA03 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.36■■□□□ 1.17
Slc46a2Q8CA03 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.36■■□□□ 1.17
Slc46a2Q8CA03 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.36■■□□□ 1.17
Slc46a2Q8CA03 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.36■■□□□ 1.17
Slc46a2Q8CA03 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.36■■□□□ 1.17
Slc46a2Q8CA03 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Slc46a2Q8CA03 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.35■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms