Protein–RNA interactions for Protein: Q8C5U0

4933409G03Rik, RIKEN cDNA 4933409G03 gene, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933409G03RikQ8C5U0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
4933409G03RikQ8C5U0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC25.86■■□□□ 1.73
4933409G03RikQ8C5U0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
4933409G03RikQ8C5U0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
4933409G03RikQ8C5U0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
4933409G03RikQ8C5U0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC25.85■■□□□ 1.73
4933409G03RikQ8C5U0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
4933409G03RikQ8C5U0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
4933409G03RikQ8C5U0 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.84■■□□□ 1.73
4933409G03RikQ8C5U0 Gm4799-201ENSMUST00000095396 657 ntBASIC25.84■■□□□ 1.73
4933409G03RikQ8C5U0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
4933409G03RikQ8C5U0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
4933409G03RikQ8C5U0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC25.83■■□□□ 1.73
4933409G03RikQ8C5U0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
4933409G03RikQ8C5U0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
4933409G03RikQ8C5U0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
4933409G03RikQ8C5U0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
4933409G03RikQ8C5U0 Gm37136-201ENSMUST00000194368 194 ntBASIC25.79■■□□□ 1.72
4933409G03RikQ8C5U0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
4933409G03RikQ8C5U0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
4933409G03RikQ8C5U0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
4933409G03RikQ8C5U0 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
4933409G03RikQ8C5U0 AC154454.1-201ENSMUST00000225253 216 ntBASIC25.78■■□□□ 1.72
4933409G03RikQ8C5U0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC25.78■■□□□ 1.72
4933409G03RikQ8C5U0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
4933409G03RikQ8C5U0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC25.76■■□□□ 1.71
4933409G03RikQ8C5U0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
4933409G03RikQ8C5U0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
4933409G03RikQ8C5U0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
4933409G03RikQ8C5U0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
4933409G03RikQ8C5U0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
4933409G03RikQ8C5U0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
4933409G03RikQ8C5U0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
4933409G03RikQ8C5U0 Mir3960-201ENSMUST00000198213 73 ntBASIC25.74■■□□□ 1.71
4933409G03RikQ8C5U0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
4933409G03RikQ8C5U0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
4933409G03RikQ8C5U0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
4933409G03RikQ8C5U0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
4933409G03RikQ8C5U0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
4933409G03RikQ8C5U0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
4933409G03RikQ8C5U0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
4933409G03RikQ8C5U0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
4933409G03RikQ8C5U0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
4933409G03RikQ8C5U0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC25.71■■□□□ 1.71
4933409G03RikQ8C5U0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
4933409G03RikQ8C5U0 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
4933409G03RikQ8C5U0 Pkd1-207ENSMUST00000228550 1050 ntBASIC25.7■■□□□ 1.7
4933409G03RikQ8C5U0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
4933409G03RikQ8C5U0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
4933409G03RikQ8C5U0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
4933409G03RikQ8C5U0 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
4933409G03RikQ8C5U0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
4933409G03RikQ8C5U0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC25.67■■□□□ 1.7
4933409G03RikQ8C5U0 Cap2-205ENSMUST00000225824 1634 ntBASIC25.67■■□□□ 1.7
4933409G03RikQ8C5U0 Scarna2-201ENSMUST00000157560 414 ntBASIC25.67■■□□□ 1.7
4933409G03RikQ8C5U0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
4933409G03RikQ8C5U0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
4933409G03RikQ8C5U0 Gm11687-201ENSMUST00000118911 886 ntBASIC25.66■■□□□ 1.7
4933409G03RikQ8C5U0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC25.66■■□□□ 1.7
4933409G03RikQ8C5U0 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
4933409G03RikQ8C5U0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
4933409G03RikQ8C5U0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
4933409G03RikQ8C5U0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
4933409G03RikQ8C5U0 Gm9806-201ENSMUST00000051080 552 ntBASIC25.65■■□□□ 1.7
4933409G03RikQ8C5U0 Gm13889-201ENSMUST00000099689 1386 ntBASIC25.65■■□□□ 1.7
4933409G03RikQ8C5U0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
4933409G03RikQ8C5U0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
4933409G03RikQ8C5U0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
4933409G03RikQ8C5U0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
4933409G03RikQ8C5U0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.69
4933409G03RikQ8C5U0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
4933409G03RikQ8C5U0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
4933409G03RikQ8C5U0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC25.63■■□□□ 1.69
4933409G03RikQ8C5U0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.63■■□□□ 1.69
4933409G03RikQ8C5U0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC25.62■■□□□ 1.69
4933409G03RikQ8C5U0 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC25.62■■□□□ 1.69
4933409G03RikQ8C5U0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC25.62■■□□□ 1.69
4933409G03RikQ8C5U0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC25.61■■□□□ 1.69
4933409G03RikQ8C5U0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC25.61■■□□□ 1.69
4933409G03RikQ8C5U0 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
4933409G03RikQ8C5U0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC25.6■■□□□ 1.69
4933409G03RikQ8C5U0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
4933409G03RikQ8C5U0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
4933409G03RikQ8C5U0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
4933409G03RikQ8C5U0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC25.59■■□□□ 1.69
4933409G03RikQ8C5U0 Gm45364-201ENSMUST00000210883 159 ntBASIC25.59■■□□□ 1.69
4933409G03RikQ8C5U0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
4933409G03RikQ8C5U0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
4933409G03RikQ8C5U0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
4933409G03RikQ8C5U0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
4933409G03RikQ8C5U0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
4933409G03RikQ8C5U0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
4933409G03RikQ8C5U0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
4933409G03RikQ8C5U0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
4933409G03RikQ8C5U0 Gm16437-201ENSMUST00000025669 507 ntBASIC25.56■■□□□ 1.68
4933409G03RikQ8C5U0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
4933409G03RikQ8C5U0 Gm12818-201ENSMUST00000117562 1349 ntBASIC25.56■■□□□ 1.68
4933409G03RikQ8C5U0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
4933409G03RikQ8C5U0 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
4933409G03RikQ8C5U0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 8.2 ms