Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Gm30023-201ENSMUST00000197970 889 ntBASIC29.47■■■□□ 2.31
Ptcd1Q8C2E4 Gm9806-201ENSMUST00000051080 552 ntBASIC29.47■■■□□ 2.31
Ptcd1Q8C2E4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC29.47■■■□□ 2.31
Ptcd1Q8C2E4 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Ptcd1Q8C2E4 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC29.46■■■□□ 2.31
Ptcd1Q8C2E4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
Ptcd1Q8C2E4 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Ptcd1Q8C2E4 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC29.44■■■□□ 2.3
Ptcd1Q8C2E4 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
Ptcd1Q8C2E4 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Ptcd1Q8C2E4 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Ptcd1Q8C2E4 Gm16437-201ENSMUST00000025669 507 ntBASIC29.42■■■□□ 2.3
Ptcd1Q8C2E4 Gm4799-201ENSMUST00000095396 657 ntBASIC29.42■■■□□ 2.3
Ptcd1Q8C2E4 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Ptcd1Q8C2E4 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Ptcd1Q8C2E4 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC29.4■■■□□ 2.3
Ptcd1Q8C2E4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Ptcd1Q8C2E4 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC29.39■■■□□ 2.3
Ptcd1Q8C2E4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC29.38■■■□□ 2.29
Ptcd1Q8C2E4 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC29.38■■■□□ 2.29
Ptcd1Q8C2E4 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Ptcd1Q8C2E4 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Ptcd1Q8C2E4 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Ptcd1Q8C2E4 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Ptcd1Q8C2E4 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Ptcd1Q8C2E4 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Ptcd1Q8C2E4 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC29.36■■■□□ 2.29
Ptcd1Q8C2E4 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
Ptcd1Q8C2E4 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC29.35■■■□□ 2.29
Ptcd1Q8C2E4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC29.35■■■□□ 2.29
Ptcd1Q8C2E4 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Ptcd1Q8C2E4 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Ptcd1Q8C2E4 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC29.31■■■□□ 2.28
Ptcd1Q8C2E4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC29.3■■■□□ 2.28
Ptcd1Q8C2E4 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC29.29■■■□□ 2.28
Ptcd1Q8C2E4 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC29.29■■■□□ 2.28
Ptcd1Q8C2E4 Pkd1-207ENSMUST00000228550 1050 ntBASIC29.29■■■□□ 2.28
Ptcd1Q8C2E4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Ptcd1Q8C2E4 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC29.28■■■□□ 2.28
Ptcd1Q8C2E4 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC29.28■■■□□ 2.28
Ptcd1Q8C2E4 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Ptcd1Q8C2E4 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Ptcd1Q8C2E4 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Ptcd1Q8C2E4 Gm7332-201ENSMUST00000118351 454 ntBASIC29.27■■■□□ 2.28
Ptcd1Q8C2E4 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Ptcd1Q8C2E4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC29.27■■■□□ 2.28
Ptcd1Q8C2E4 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Ptcd1Q8C2E4 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Ptcd1Q8C2E4 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Ptcd1Q8C2E4 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC29.25■■■□□ 2.27
Ptcd1Q8C2E4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Ptcd1Q8C2E4 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Ptcd1Q8C2E4 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC29.24■■■□□ 2.27
Ptcd1Q8C2E4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC29.23■■■□□ 2.27
Ptcd1Q8C2E4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Ptcd1Q8C2E4 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC29.22■■■□□ 2.27
Ptcd1Q8C2E4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Ptcd1Q8C2E4 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Ptcd1Q8C2E4 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Ptcd1Q8C2E4 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Ptcd1Q8C2E4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC29.21■■■□□ 2.27
Ptcd1Q8C2E4 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC29.2■■■□□ 2.27
Ptcd1Q8C2E4 Pcf11-205ENSMUST00000208255 1720 ntBASIC29.2■■■□□ 2.27
Ptcd1Q8C2E4 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Ptcd1Q8C2E4 Gm27502-201ENSMUST00000183495 199 ntBASIC29.19■■■□□ 2.26
Ptcd1Q8C2E4 Gm15039-201ENSMUST00000118914 875 ntBASIC29.18■■■□□ 2.26
Ptcd1Q8C2E4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Ptcd1Q8C2E4 AC154454.1-201ENSMUST00000225253 216 ntBASIC29.18■■■□□ 2.26
Ptcd1Q8C2E4 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Ptcd1Q8C2E4 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC29.17■■■□□ 2.26
Ptcd1Q8C2E4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC29.17■■■□□ 2.26
Ptcd1Q8C2E4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Ptcd1Q8C2E4 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC29.16■■■□□ 2.26
Ptcd1Q8C2E4 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Ptcd1Q8C2E4 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Ptcd1Q8C2E4 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC29.15■■■□□ 2.26
Ptcd1Q8C2E4 Mir3960-201ENSMUST00000198213 73 ntBASIC29.15■■■□□ 2.26
Ptcd1Q8C2E4 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Ptcd1Q8C2E4 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC29.14■■■□□ 2.26
Ptcd1Q8C2E4 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC29.14■■■□□ 2.25
Ptcd1Q8C2E4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
Ptcd1Q8C2E4 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC29.14■■■□□ 2.25
Ptcd1Q8C2E4 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Ptcd1Q8C2E4 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Ptcd1Q8C2E4 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Ptcd1Q8C2E4 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Ptcd1Q8C2E4 Amer2-203ENSMUST00000225247 2662 ntBASIC29.12■■■□□ 2.25
Ptcd1Q8C2E4 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Ptcd1Q8C2E4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
Ptcd1Q8C2E4 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC29.12■■■□□ 2.25
Ptcd1Q8C2E4 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Ptcd1Q8C2E4 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Ptcd1Q8C2E4 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Ptcd1Q8C2E4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC29.1■■■□□ 2.25
Ptcd1Q8C2E4 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Ptcd1Q8C2E4 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC29.09■■■□□ 2.25
Ptcd1Q8C2E4 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Ptcd1Q8C2E4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC29.08■■■□□ 2.25
Ptcd1Q8C2E4 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
Ptcd1Q8C2E4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms