Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Vps9d1Q8C190 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps9d1Q8C190 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps9d1Q8C190 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps9d1Q8C190 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.84■■□□□ 1.09
Vps9d1Q8C190 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vps9d1Q8C190 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vps9d1Q8C190 Gm24970-201ENSMUST00000175582 82 ntBASIC21.83■■□□□ 1.09
Vps9d1Q8C190 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Vps9d1Q8C190 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Vps9d1Q8C190 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Vps9d1Q8C190 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Vps9d1Q8C190 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.81■■□□□ 1.08
Vps9d1Q8C190 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Vps9d1Q8C190 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Vps9d1Q8C190 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
Vps9d1Q8C190 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.8■■□□□ 1.08
Vps9d1Q8C190 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Vps9d1Q8C190 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.79■■□□□ 1.08
Vps9d1Q8C190 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Vps9d1Q8C190 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Vps9d1Q8C190 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
Vps9d1Q8C190 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Vps9d1Q8C190 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Vps9d1Q8C190 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vps9d1Q8C190 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Vps9d1Q8C190 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vps9d1Q8C190 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vps9d1Q8C190 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.76■■□□□ 1.07
Vps9d1Q8C190 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vps9d1Q8C190 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vps9d1Q8C190 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vps9d1Q8C190 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.74■■□□□ 1.07
Vps9d1Q8C190 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Vps9d1Q8C190 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vps9d1Q8C190 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Vps9d1Q8C190 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Vps9d1Q8C190 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.74■■□□□ 1.07
Vps9d1Q8C190 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vps9d1Q8C190 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vps9d1Q8C190 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vps9d1Q8C190 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Vps9d1Q8C190 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
Vps9d1Q8C190 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vps9d1Q8C190 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Vps9d1Q8C190 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.73■■□□□ 1.07
Vps9d1Q8C190 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Vps9d1Q8C190 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vps9d1Q8C190 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Vps9d1Q8C190 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vps9d1Q8C190 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.71■■□□□ 1.07
Vps9d1Q8C190 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vps9d1Q8C190 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vps9d1Q8C190 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vps9d1Q8C190 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vps9d1Q8C190 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.7■■□□□ 1.06
Vps9d1Q8C190 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vps9d1Q8C190 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vps9d1Q8C190 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vps9d1Q8C190 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vps9d1Q8C190 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Vps9d1Q8C190 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.69■■□□□ 1.06
Vps9d1Q8C190 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vps9d1Q8C190 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vps9d1Q8C190 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vps9d1Q8C190 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vps9d1Q8C190 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Vps9d1Q8C190 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Vps9d1Q8C190 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.67■■□□□ 1.06
Vps9d1Q8C190 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Vps9d1Q8C190 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.67■■□□□ 1.06
Vps9d1Q8C190 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Vps9d1Q8C190 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vps9d1Q8C190 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vps9d1Q8C190 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vps9d1Q8C190 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vps9d1Q8C190 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Vps9d1Q8C190 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vps9d1Q8C190 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vps9d1Q8C190 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.66■■□□□ 1.06
Vps9d1Q8C190 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vps9d1Q8C190 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vps9d1Q8C190 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Vps9d1Q8C190 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Vps9d1Q8C190 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Vps9d1Q8C190 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Vps9d1Q8C190 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Vps9d1Q8C190 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vps9d1Q8C190 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vps9d1Q8C190 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Vps9d1Q8C190 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Vps9d1Q8C190 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Vps9d1Q8C190 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vps9d1Q8C190 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vps9d1Q8C190 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Vps9d1Q8C190 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vps9d1Q8C190 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.61■■□□□ 1.05
Vps9d1Q8C190 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Vps9d1Q8C190 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Vps9d1Q8C190 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms