Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cdk5rap1Q8BTW8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.48■■□□□ 1.19
Cdk5rap1Q8BTW8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
Cdk5rap1Q8BTW8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cdk5rap1Q8BTW8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cdk5rap1Q8BTW8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Cdk5rap1Q8BTW8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cdk5rap1Q8BTW8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Cdk5rap1Q8BTW8 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Cdk5rap1Q8BTW8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cdk5rap1Q8BTW8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Cdk5rap1Q8BTW8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.45■■□□□ 1.18
Cdk5rap1Q8BTW8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Cdk5rap1Q8BTW8 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cdk5rap1Q8BTW8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cdk5rap1Q8BTW8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cdk5rap1Q8BTW8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.43■■□□□ 1.18
Cdk5rap1Q8BTW8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cdk5rap1Q8BTW8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Cdk5rap1Q8BTW8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cdk5rap1Q8BTW8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Cdk5rap1Q8BTW8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cdk5rap1Q8BTW8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.42■■□□□ 1.18
Cdk5rap1Q8BTW8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cdk5rap1Q8BTW8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Cdk5rap1Q8BTW8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cdk5rap1Q8BTW8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cdk5rap1Q8BTW8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
Cdk5rap1Q8BTW8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.4■■□□□ 1.18
Cdk5rap1Q8BTW8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cdk5rap1Q8BTW8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Cdk5rap1Q8BTW8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Cdk5rap1Q8BTW8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Cdk5rap1Q8BTW8 Gm6311-201ENSMUST00000073790 878 ntBASIC22.38■■□□□ 1.17
Cdk5rap1Q8BTW8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Cdk5rap1Q8BTW8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cdk5rap1Q8BTW8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Cdk5rap1Q8BTW8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.36■■□□□ 1.17
Cdk5rap1Q8BTW8 Gm37136-201ENSMUST00000194368 194 ntBASIC22.36■■□□□ 1.17
Cdk5rap1Q8BTW8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Cdk5rap1Q8BTW8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Cdk5rap1Q8BTW8 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cdk5rap1Q8BTW8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cdk5rap1Q8BTW8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.35■■□□□ 1.17
Cdk5rap1Q8BTW8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cdk5rap1Q8BTW8 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
Cdk5rap1Q8BTW8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cdk5rap1Q8BTW8 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.34■■□□□ 1.17
Cdk5rap1Q8BTW8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cdk5rap1Q8BTW8 Amer2-203ENSMUST00000225247 2662 ntBASIC22.34■■□□□ 1.17
Cdk5rap1Q8BTW8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Cdk5rap1Q8BTW8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.33■■□□□ 1.17
Cdk5rap1Q8BTW8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
Cdk5rap1Q8BTW8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Cdk5rap1Q8BTW8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Cdk5rap1Q8BTW8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Cdk5rap1Q8BTW8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cdk5rap1Q8BTW8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.31■■□□□ 1.16
Cdk5rap1Q8BTW8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Cdk5rap1Q8BTW8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Cdk5rap1Q8BTW8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
Cdk5rap1Q8BTW8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Cdk5rap1Q8BTW8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cdk5rap1Q8BTW8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.29■■□□□ 1.16
Cdk5rap1Q8BTW8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cdk5rap1Q8BTW8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cdk5rap1Q8BTW8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.28■■□□□ 1.16
Cdk5rap1Q8BTW8 Gm4799-201ENSMUST00000095396 657 ntBASIC22.28■■□□□ 1.16
Cdk5rap1Q8BTW8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cdk5rap1Q8BTW8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Cdk5rap1Q8BTW8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cdk5rap1Q8BTW8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Cdk5rap1Q8BTW8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Cdk5rap1Q8BTW8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.26■■□□□ 1.15
Cdk5rap1Q8BTW8 Mir6538-201ENSMUST00000183713 110 ntBASIC22.26■■□□□ 1.15
Cdk5rap1Q8BTW8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Cdk5rap1Q8BTW8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cdk5rap1Q8BTW8 Gm11175-201ENSMUST00000116172 543 ntBASIC22.25■■□□□ 1.15
Cdk5rap1Q8BTW8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.25■■□□□ 1.15
Cdk5rap1Q8BTW8 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.25■■□□□ 1.15
Cdk5rap1Q8BTW8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cdk5rap1Q8BTW8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cdk5rap1Q8BTW8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cdk5rap1Q8BTW8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Cdk5rap1Q8BTW8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cdk5rap1Q8BTW8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cdk5rap1Q8BTW8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.23■■□□□ 1.15
Cdk5rap1Q8BTW8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cdk5rap1Q8BTW8 Mir3960-201ENSMUST00000198213 73 ntBASIC22.21■■□□□ 1.15
Cdk5rap1Q8BTW8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cdk5rap1Q8BTW8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Cdk5rap1Q8BTW8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cdk5rap1Q8BTW8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cdk5rap1Q8BTW8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cdk5rap1Q8BTW8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.19■■□□□ 1.14
Cdk5rap1Q8BTW8 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.17■■□□□ 1.14
Cdk5rap1Q8BTW8 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.16■■□□□ 1.14
Cdk5rap1Q8BTW8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cdk5rap1Q8BTW8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cdk5rap1Q8BTW8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms