Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
Cpsf7Q8BTV2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Cpsf7Q8BTV2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.59■■□□□ 1.37
Cpsf7Q8BTV2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.58■■□□□ 1.37
Cpsf7Q8BTV2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Cpsf7Q8BTV2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.57■■□□□ 1.36
Cpsf7Q8BTV2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Cpsf7Q8BTV2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Cpsf7Q8BTV2 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Cpsf7Q8BTV2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Cpsf7Q8BTV2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Cpsf7Q8BTV2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Cpsf7Q8BTV2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Cpsf7Q8BTV2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Cpsf7Q8BTV2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Cpsf7Q8BTV2 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Cpsf7Q8BTV2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Cpsf7Q8BTV2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.55■■□□□ 1.36
Cpsf7Q8BTV2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.54■■□□□ 1.36
Cpsf7Q8BTV2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Cpsf7Q8BTV2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.53■■□□□ 1.36
Cpsf7Q8BTV2 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Cpsf7Q8BTV2 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Cpsf7Q8BTV2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Cpsf7Q8BTV2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Cpsf7Q8BTV2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Cpsf7Q8BTV2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Cpsf7Q8BTV2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Cpsf7Q8BTV2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Cpsf7Q8BTV2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Cpsf7Q8BTV2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Cpsf7Q8BTV2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Cpsf7Q8BTV2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Cpsf7Q8BTV2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Cpsf7Q8BTV2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.49■■□□□ 1.35
Cpsf7Q8BTV2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Cpsf7Q8BTV2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Cpsf7Q8BTV2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Cpsf7Q8BTV2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Cpsf7Q8BTV2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Cpsf7Q8BTV2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Cpsf7Q8BTV2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Cpsf7Q8BTV2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
Cpsf7Q8BTV2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
Cpsf7Q8BTV2 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.48■■□□□ 1.35
Cpsf7Q8BTV2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Cpsf7Q8BTV2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Cpsf7Q8BTV2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.45■■□□□ 1.35
Cpsf7Q8BTV2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Cpsf7Q8BTV2 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Cpsf7Q8BTV2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Cpsf7Q8BTV2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Cpsf7Q8BTV2 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Cpsf7Q8BTV2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cpsf7Q8BTV2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Cpsf7Q8BTV2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Cpsf7Q8BTV2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.41■■□□□ 1.34
Cpsf7Q8BTV2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Cpsf7Q8BTV2 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
Cpsf7Q8BTV2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
Cpsf7Q8BTV2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
Cpsf7Q8BTV2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Cpsf7Q8BTV2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Cpsf7Q8BTV2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Cpsf7Q8BTV2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.39■■□□□ 1.34
Cpsf7Q8BTV2 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.39■■□□□ 1.33
Cpsf7Q8BTV2 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Cpsf7Q8BTV2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Cpsf7Q8BTV2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Cpsf7Q8BTV2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
Cpsf7Q8BTV2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Cpsf7Q8BTV2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.37■■□□□ 1.33
Cpsf7Q8BTV2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
Cpsf7Q8BTV2 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC23.36■■□□□ 1.33
Cpsf7Q8BTV2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cpsf7Q8BTV2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cpsf7Q8BTV2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cpsf7Q8BTV2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cpsf7Q8BTV2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Cpsf7Q8BTV2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cpsf7Q8BTV2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Cpsf7Q8BTV2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Cpsf7Q8BTV2 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Cpsf7Q8BTV2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cpsf7Q8BTV2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Cpsf7Q8BTV2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Cpsf7Q8BTV2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cpsf7Q8BTV2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.32■■□□□ 1.32
Cpsf7Q8BTV2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.32■■□□□ 1.32
Cpsf7Q8BTV2 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cpsf7Q8BTV2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Cpsf7Q8BTV2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Cpsf7Q8BTV2 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cpsf7Q8BTV2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cpsf7Q8BTV2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cpsf7Q8BTV2 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cpsf7Q8BTV2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cpsf7Q8BTV2 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cpsf7Q8BTV2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cpsf7Q8BTV2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms