Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rnf38Q8BI21 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Rnf38Q8BI21 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC22.71■■□□□ 1.23
Rnf38Q8BI21 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Rnf38Q8BI21 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rnf38Q8BI21 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Rnf38Q8BI21 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Rnf38Q8BI21 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.69■■□□□ 1.22
Rnf38Q8BI21 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.68■■□□□ 1.22
Rnf38Q8BI21 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.68■■□□□ 1.22
Rnf38Q8BI21 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.68■■□□□ 1.22
Rnf38Q8BI21 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rnf38Q8BI21 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rnf38Q8BI21 Gm45855-201ENSMUST00000212546 880 ntBASIC22.67■■□□□ 1.22
Rnf38Q8BI21 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.67■■□□□ 1.22
Rnf38Q8BI21 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rnf38Q8BI21 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rnf38Q8BI21 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rnf38Q8BI21 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.66■■□□□ 1.22
Rnf38Q8BI21 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rnf38Q8BI21 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Rnf38Q8BI21 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rnf38Q8BI21 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rnf38Q8BI21 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Rnf38Q8BI21 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.65■■□□□ 1.22
Rnf38Q8BI21 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rnf38Q8BI21 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Rnf38Q8BI21 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.64■■□□□ 1.22
Rnf38Q8BI21 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rnf38Q8BI21 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf38Q8BI21 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rnf38Q8BI21 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rnf38Q8BI21 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rnf38Q8BI21 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.62■■□□□ 1.21
Rnf38Q8BI21 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Rnf38Q8BI21 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rnf38Q8BI21 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Rnf38Q8BI21 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rnf38Q8BI21 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Rnf38Q8BI21 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.61■■□□□ 1.21
Rnf38Q8BI21 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rnf38Q8BI21 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rnf38Q8BI21 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rnf38Q8BI21 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rnf38Q8BI21 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rnf38Q8BI21 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rnf38Q8BI21 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rnf38Q8BI21 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
Rnf38Q8BI21 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Rnf38Q8BI21 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Rnf38Q8BI21 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rnf38Q8BI21 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rnf38Q8BI21 Gm24970-201ENSMUST00000175582 82 ntBASIC22.58■■□□□ 1.21
Rnf38Q8BI21 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
Rnf38Q8BI21 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rnf38Q8BI21 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rnf38Q8BI21 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rnf38Q8BI21 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC22.57■■□□□ 1.2
Rnf38Q8BI21 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Rnf38Q8BI21 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rnf38Q8BI21 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
Rnf38Q8BI21 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rnf38Q8BI21 Gm30023-201ENSMUST00000197970 889 ntBASIC22.56■■□□□ 1.2
Rnf38Q8BI21 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Rnf38Q8BI21 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rnf38Q8BI21 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rnf38Q8BI21 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rnf38Q8BI21 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.55■■□□□ 1.2
Rnf38Q8BI21 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Rnf38Q8BI21 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rnf38Q8BI21 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rnf38Q8BI21 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rnf38Q8BI21 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rnf38Q8BI21 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rnf38Q8BI21 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rnf38Q8BI21 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rnf38Q8BI21 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Rnf38Q8BI21 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rnf38Q8BI21 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rnf38Q8BI21 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rnf38Q8BI21 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rnf38Q8BI21 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Rnf38Q8BI21 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rnf38Q8BI21 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Rnf38Q8BI21 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf38Q8BI21 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf38Q8BI21 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf38Q8BI21 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf38Q8BI21 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rnf38Q8BI21 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rnf38Q8BI21 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Rnf38Q8BI21 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rnf38Q8BI21 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Rnf38Q8BI21 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rnf38Q8BI21 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.47■■□□□ 1.19
Rnf38Q8BI21 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.47■■□□□ 1.19
Rnf38Q8BI21 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
Rnf38Q8BI21 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.47■■□□□ 1.19
Rnf38Q8BI21 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rnf38Q8BI21 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 181.6 ms