Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Depdc1bQ8BH88 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Depdc1bQ8BH88 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Depdc1bQ8BH88 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Depdc1bQ8BH88 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC25.48■■□□□ 1.67
Depdc1bQ8BH88 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
Depdc1bQ8BH88 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Depdc1bQ8BH88 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC25.47■■□□□ 1.67
Depdc1bQ8BH88 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
Depdc1bQ8BH88 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
Depdc1bQ8BH88 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Depdc1bQ8BH88 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Depdc1bQ8BH88 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
Depdc1bQ8BH88 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Depdc1bQ8BH88 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Depdc1bQ8BH88 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Depdc1bQ8BH88 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Depdc1bQ8BH88 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Depdc1bQ8BH88 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25.43■■□□□ 1.66
Depdc1bQ8BH88 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
Depdc1bQ8BH88 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC25.42■■□□□ 1.66
Depdc1bQ8BH88 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC25.42■■□□□ 1.66
Depdc1bQ8BH88 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Depdc1bQ8BH88 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Depdc1bQ8BH88 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
Depdc1bQ8BH88 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25.41■■□□□ 1.66
Depdc1bQ8BH88 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Depdc1bQ8BH88 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Depdc1bQ8BH88 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
Depdc1bQ8BH88 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Depdc1bQ8BH88 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Depdc1bQ8BH88 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Depdc1bQ8BH88 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Depdc1bQ8BH88 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Depdc1bQ8BH88 AC153890.1-201ENSMUST00000220021 2469 ntBASIC25.39■■□□□ 1.65
Depdc1bQ8BH88 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Depdc1bQ8BH88 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Depdc1bQ8BH88 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Depdc1bQ8BH88 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC25.36■■□□□ 1.65
Depdc1bQ8BH88 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
Depdc1bQ8BH88 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Depdc1bQ8BH88 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Depdc1bQ8BH88 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Depdc1bQ8BH88 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.35■■□□□ 1.65
Depdc1bQ8BH88 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.35■■□□□ 1.65
Depdc1bQ8BH88 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Depdc1bQ8BH88 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
Depdc1bQ8BH88 Gm7432-201ENSMUST00000210343 879 ntBASIC25.34■■□□□ 1.65
Depdc1bQ8BH88 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.33■■□□□ 1.65
Depdc1bQ8BH88 Gm30023-201ENSMUST00000197970 889 ntBASIC25.33■■□□□ 1.65
Depdc1bQ8BH88 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC25.33■■□□□ 1.65
Depdc1bQ8BH88 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Depdc1bQ8BH88 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Depdc1bQ8BH88 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Depdc1bQ8BH88 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
Depdc1bQ8BH88 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Depdc1bQ8BH88 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Depdc1bQ8BH88 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
Depdc1bQ8BH88 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Depdc1bQ8BH88 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
Depdc1bQ8BH88 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Depdc1bQ8BH88 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC25.31■■□□□ 1.64
Depdc1bQ8BH88 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC25.3■■□□□ 1.64
Depdc1bQ8BH88 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Depdc1bQ8BH88 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC25.3■■□□□ 1.64
Depdc1bQ8BH88 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
Depdc1bQ8BH88 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Depdc1bQ8BH88 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
Depdc1bQ8BH88 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25.28■■□□□ 1.64
Depdc1bQ8BH88 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
Depdc1bQ8BH88 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.28■■□□□ 1.64
Depdc1bQ8BH88 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Depdc1bQ8BH88 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Depdc1bQ8BH88 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Depdc1bQ8BH88 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
Depdc1bQ8BH88 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC25.26■■□□□ 1.63
Depdc1bQ8BH88 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Depdc1bQ8BH88 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Depdc1bQ8BH88 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Depdc1bQ8BH88 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
Depdc1bQ8BH88 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
Depdc1bQ8BH88 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC25.24■■□□□ 1.63
Depdc1bQ8BH88 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC25.23■■□□□ 1.63
Depdc1bQ8BH88 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
Depdc1bQ8BH88 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC25.23■■□□□ 1.63
Depdc1bQ8BH88 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Depdc1bQ8BH88 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Depdc1bQ8BH88 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Depdc1bQ8BH88 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Depdc1bQ8BH88 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Depdc1bQ8BH88 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Depdc1bQ8BH88 AC122428.3-201ENSMUST00000215551 2290 ntBASIC25.19■■□□□ 1.62
Depdc1bQ8BH88 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Depdc1bQ8BH88 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Depdc1bQ8BH88 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Depdc1bQ8BH88 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Depdc1bQ8BH88 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Depdc1bQ8BH88 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Depdc1bQ8BH88 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Depdc1bQ8BH88 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 239.1 ms