Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Samm50Q8BGH2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC27.43■■□□□ 1.98
Samm50Q8BGH2 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC27.43■■□□□ 1.98
Samm50Q8BGH2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Samm50Q8BGH2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC27.42■■□□□ 1.98
Samm50Q8BGH2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
Samm50Q8BGH2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Samm50Q8BGH2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Samm50Q8BGH2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Samm50Q8BGH2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Samm50Q8BGH2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC27.4■■□□□ 1.98
Samm50Q8BGH2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
Samm50Q8BGH2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Samm50Q8BGH2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
Samm50Q8BGH2 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
Samm50Q8BGH2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Samm50Q8BGH2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Samm50Q8BGH2 Gm8503-201ENSMUST00000118131 455 ntBASIC27.38■■□□□ 1.97
Samm50Q8BGH2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
Samm50Q8BGH2 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Samm50Q8BGH2 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Samm50Q8BGH2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Samm50Q8BGH2 Gm42809-201ENSMUST00000198429 1138 ntBASIC27.37■■□□□ 1.97
Samm50Q8BGH2 Nkain2-201ENSMUST00000092602 558 ntBASIC27.37■■□□□ 1.97
Samm50Q8BGH2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Samm50Q8BGH2 AC122428.3-201ENSMUST00000215551 2290 ntBASIC27.36■■□□□ 1.97
Samm50Q8BGH2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Samm50Q8BGH2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
Samm50Q8BGH2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
Samm50Q8BGH2 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Samm50Q8BGH2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Samm50Q8BGH2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Samm50Q8BGH2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Samm50Q8BGH2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
Samm50Q8BGH2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Samm50Q8BGH2 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC27.32■■□□□ 1.96
Samm50Q8BGH2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC27.32■■□□□ 1.96
Samm50Q8BGH2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Samm50Q8BGH2 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Samm50Q8BGH2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Samm50Q8BGH2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Samm50Q8BGH2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC27.3■■□□□ 1.96
Samm50Q8BGH2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
Samm50Q8BGH2 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Samm50Q8BGH2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Samm50Q8BGH2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Samm50Q8BGH2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Samm50Q8BGH2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
Samm50Q8BGH2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
Samm50Q8BGH2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC27.26■■□□□ 1.95
Samm50Q8BGH2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Samm50Q8BGH2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Samm50Q8BGH2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
Samm50Q8BGH2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Samm50Q8BGH2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Samm50Q8BGH2 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Samm50Q8BGH2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Samm50Q8BGH2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
Samm50Q8BGH2 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Samm50Q8BGH2 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Samm50Q8BGH2 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Samm50Q8BGH2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
Samm50Q8BGH2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
Samm50Q8BGH2 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Samm50Q8BGH2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Samm50Q8BGH2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC27.18■■□□□ 1.94
Samm50Q8BGH2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Samm50Q8BGH2 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Samm50Q8BGH2 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Samm50Q8BGH2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Samm50Q8BGH2 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Samm50Q8BGH2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
Samm50Q8BGH2 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC27.16■■□□□ 1.94
Samm50Q8BGH2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC27.16■■□□□ 1.94
Samm50Q8BGH2 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC27.16■■□□□ 1.94
Samm50Q8BGH2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC27.16■■□□□ 1.94
Samm50Q8BGH2 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Samm50Q8BGH2 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Samm50Q8BGH2 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Samm50Q8BGH2 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Samm50Q8BGH2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Samm50Q8BGH2 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
Samm50Q8BGH2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Samm50Q8BGH2 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Samm50Q8BGH2 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
Samm50Q8BGH2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC27.13■■□□□ 1.93
Samm50Q8BGH2 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Samm50Q8BGH2 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Samm50Q8BGH2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Samm50Q8BGH2 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Samm50Q8BGH2 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Samm50Q8BGH2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
Samm50Q8BGH2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Samm50Q8BGH2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Samm50Q8BGH2 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Samm50Q8BGH2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
Samm50Q8BGH2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC27.09■■□□□ 1.93
Samm50Q8BGH2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
Samm50Q8BGH2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
Samm50Q8BGH2 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms