Protein–RNA interactions for Protein: Q8BGB5

Limd2, LIM domain-containing protein 2, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limd2Q8BGB5 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Limd2Q8BGB5 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Limd2Q8BGB5 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.34
Limd2Q8BGB5 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Limd2Q8BGB5 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Limd2Q8BGB5 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Limd2Q8BGB5 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC12.94□□□□□ -0.34
Limd2Q8BGB5 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Limd2Q8BGB5 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Limd2Q8BGB5 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Limd2Q8BGB5 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC12.94□□□□□ -0.34
Limd2Q8BGB5 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Limd2Q8BGB5 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Limd2Q8BGB5 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Limd2Q8BGB5 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Limd2Q8BGB5 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC12.93□□□□□ -0.34
Limd2Q8BGB5 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC12.93□□□□□ -0.34
Limd2Q8BGB5 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Limd2Q8BGB5 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Limd2Q8BGB5 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Limd2Q8BGB5 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Limd2Q8BGB5 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Limd2Q8BGB5 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Limd2Q8BGB5 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Limd2Q8BGB5 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Limd2Q8BGB5 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Limd2Q8BGB5 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC12.91□□□□□ -0.34
Limd2Q8BGB5 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Limd2Q8BGB5 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Limd2Q8BGB5 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC12.91□□□□□ -0.34
Limd2Q8BGB5 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Limd2Q8BGB5 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Limd2Q8BGB5 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Limd2Q8BGB5 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Limd2Q8BGB5 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Limd2Q8BGB5 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Limd2Q8BGB5 Gm6345-201ENSMUST00000180378 1691 ntBASIC12.89□□□□□ -0.35
Limd2Q8BGB5 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Limd2Q8BGB5 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Limd2Q8BGB5 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Limd2Q8BGB5 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Limd2Q8BGB5 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Limd2Q8BGB5 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Limd2Q8BGB5 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Limd2Q8BGB5 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Limd2Q8BGB5 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Limd2Q8BGB5 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Limd2Q8BGB5 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Limd2Q8BGB5 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Limd2Q8BGB5 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Limd2Q8BGB5 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Limd2Q8BGB5 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Limd2Q8BGB5 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Limd2Q8BGB5 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Limd2Q8BGB5 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Limd2Q8BGB5 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Limd2Q8BGB5 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Limd2Q8BGB5 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Limd2Q8BGB5 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Limd2Q8BGB5 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Limd2Q8BGB5 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Limd2Q8BGB5 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Limd2Q8BGB5 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Limd2Q8BGB5 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Limd2Q8BGB5 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Limd2Q8BGB5 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Limd2Q8BGB5 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Limd2Q8BGB5 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Limd2Q8BGB5 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Limd2Q8BGB5 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Limd2Q8BGB5 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Limd2Q8BGB5 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Limd2Q8BGB5 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Limd2Q8BGB5 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Limd2Q8BGB5 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Limd2Q8BGB5 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Limd2Q8BGB5 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Limd2Q8BGB5 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Limd2Q8BGB5 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Limd2Q8BGB5 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC12.84□□□□□ -0.35
Limd2Q8BGB5 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Limd2Q8BGB5 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Limd2Q8BGB5 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Limd2Q8BGB5 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Limd2Q8BGB5 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Limd2Q8BGB5 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Limd2Q8BGB5 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC12.82□□□□□ -0.36
Limd2Q8BGB5 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Limd2Q8BGB5 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Limd2Q8BGB5 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Limd2Q8BGB5 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Limd2Q8BGB5 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Limd2Q8BGB5 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Limd2Q8BGB5 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Limd2Q8BGB5 Zfp131-207ENSMUST00000224946 1783 ntBASIC12.8□□□□□ -0.36
Limd2Q8BGB5 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
Limd2Q8BGB5 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Limd2Q8BGB5 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Limd2Q8BGB5 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Limd2Q8BGB5 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 7.9 ms