Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Usp6nlQ80XC3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Usp6nlQ80XC3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC26.48■■□□□ 1.83
Usp6nlQ80XC3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC26.48■■□□□ 1.83
Usp6nlQ80XC3 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Usp6nlQ80XC3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Usp6nlQ80XC3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Usp6nlQ80XC3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Usp6nlQ80XC3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Usp6nlQ80XC3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Usp6nlQ80XC3 AC154454.1-201ENSMUST00000225253 216 ntBASIC26.43■■□□□ 1.82
Usp6nlQ80XC3 Gm9806-201ENSMUST00000051080 552 ntBASIC26.43■■□□□ 1.82
Usp6nlQ80XC3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Usp6nlQ80XC3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Usp6nlQ80XC3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC26.42■■□□□ 1.82
Usp6nlQ80XC3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Usp6nlQ80XC3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Usp6nlQ80XC3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Usp6nlQ80XC3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Usp6nlQ80XC3 Gm4799-201ENSMUST00000095396 657 ntBASIC26.41■■□□□ 1.82
Usp6nlQ80XC3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Usp6nlQ80XC3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.4■■□□□ 1.82
Usp6nlQ80XC3 Pkd1-207ENSMUST00000228550 1050 ntBASIC26.4■■□□□ 1.82
Usp6nlQ80XC3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Usp6nlQ80XC3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Usp6nlQ80XC3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Usp6nlQ80XC3 Gm11687-201ENSMUST00000118911 886 ntBASIC26.39■■□□□ 1.82
Usp6nlQ80XC3 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.39■■□□□ 1.81
Usp6nlQ80XC3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC26.38■■□□□ 1.81
Usp6nlQ80XC3 Gm37136-201ENSMUST00000194368 194 ntBASIC26.38■■□□□ 1.81
Usp6nlQ80XC3 Mir3960-201ENSMUST00000198213 73 ntBASIC26.38■■□□□ 1.81
Usp6nlQ80XC3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC26.38■■□□□ 1.81
Usp6nlQ80XC3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Usp6nlQ80XC3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC26.37■■□□□ 1.81
Usp6nlQ80XC3 Gm12366-201ENSMUST00000121722 873 ntBASIC26.37■■□□□ 1.81
Usp6nlQ80XC3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC26.37■■□□□ 1.81
Usp6nlQ80XC3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Usp6nlQ80XC3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC26.37■■□□□ 1.81
Usp6nlQ80XC3 Gm5786-201ENSMUST00000085368 882 ntBASIC26.37■■□□□ 1.81
Usp6nlQ80XC3 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Usp6nlQ80XC3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Usp6nlQ80XC3 Gm45364-201ENSMUST00000210883 159 ntBASIC26.36■■□□□ 1.81
Usp6nlQ80XC3 Gm16437-201ENSMUST00000025669 507 ntBASIC26.36■■□□□ 1.81
Usp6nlQ80XC3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26.36■■□□□ 1.81
Usp6nlQ80XC3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Usp6nlQ80XC3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Usp6nlQ80XC3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC26.34■■□□□ 1.81
Usp6nlQ80XC3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Usp6nlQ80XC3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC26.34■■□□□ 1.81
Usp6nlQ80XC3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26.33■■□□□ 1.81
Usp6nlQ80XC3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Usp6nlQ80XC3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
Usp6nlQ80XC3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Usp6nlQ80XC3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC26.31■■□□□ 1.8
Usp6nlQ80XC3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Usp6nlQ80XC3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.29■■□□□ 1.8
Usp6nlQ80XC3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Usp6nlQ80XC3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
Usp6nlQ80XC3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Usp6nlQ80XC3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Usp6nlQ80XC3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Usp6nlQ80XC3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Usp6nlQ80XC3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Usp6nlQ80XC3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.26■■□□□ 1.79
Usp6nlQ80XC3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
Usp6nlQ80XC3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Usp6nlQ80XC3 Gm13889-201ENSMUST00000099689 1386 ntBASIC26.25■■□□□ 1.79
Usp6nlQ80XC3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Usp6nlQ80XC3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Usp6nlQ80XC3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Usp6nlQ80XC3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Usp6nlQ80XC3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC26.24■■□□□ 1.79
Usp6nlQ80XC3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Usp6nlQ80XC3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Usp6nlQ80XC3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Usp6nlQ80XC3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
Usp6nlQ80XC3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Usp6nlQ80XC3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Usp6nlQ80XC3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Usp6nlQ80XC3 Gm12818-201ENSMUST00000117562 1349 ntBASIC26.2■■□□□ 1.79
Usp6nlQ80XC3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Usp6nlQ80XC3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Usp6nlQ80XC3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Usp6nlQ80XC3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Usp6nlQ80XC3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Usp6nlQ80XC3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.18■■□□□ 1.78
Usp6nlQ80XC3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Usp6nlQ80XC3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC26.18■■□□□ 1.78
Usp6nlQ80XC3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Usp6nlQ80XC3 Zxda-201ENSMUST00000117281 2621 ntBASIC26.16■■□□□ 1.78
Usp6nlQ80XC3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
Usp6nlQ80XC3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC26.16■■□□□ 1.78
Usp6nlQ80XC3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Usp6nlQ80XC3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Usp6nlQ80XC3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Usp6nlQ80XC3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC26.15■■□□□ 1.78
Usp6nlQ80XC3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
Usp6nlQ80XC3 Gm27502-201ENSMUST00000183495 199 ntBASIC26.14■■□□□ 1.78
Usp6nlQ80XC3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Usp6nlQ80XC3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms