Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Gm7432-201ENSMUST00000210343 879 ntBASIC24.57■■□□□ 1.52
Trim62Q80V85 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Trim62Q80V85 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24.56■■□□□ 1.52
Trim62Q80V85 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC24.56■■□□□ 1.52
Trim62Q80V85 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Trim62Q80V85 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Trim62Q80V85 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Trim62Q80V85 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Trim62Q80V85 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Trim62Q80V85 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Trim62Q80V85 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Trim62Q80V85 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.51■■□□□ 1.51
Trim62Q80V85 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Trim62Q80V85 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Trim62Q80V85 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.51■■□□□ 1.51
Trim62Q80V85 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC24.51■■□□□ 1.51
Trim62Q80V85 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.51■■□□□ 1.51
Trim62Q80V85 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.5■■□□□ 1.51
Trim62Q80V85 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trim62Q80V85 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trim62Q80V85 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trim62Q80V85 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Trim62Q80V85 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Trim62Q80V85 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Trim62Q80V85 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC24.47■■□□□ 1.51
Trim62Q80V85 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Trim62Q80V85 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Trim62Q80V85 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trim62Q80V85 Gm11599-201ENSMUST00000118720 878 ntBASIC24.43■■□□□ 1.5
Trim62Q80V85 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trim62Q80V85 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Trim62Q80V85 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.41■■□□□ 1.5
Trim62Q80V85 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Trim62Q80V85 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.4■■□□□ 1.5
Trim62Q80V85 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Trim62Q80V85 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Trim62Q80V85 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Trim62Q80V85 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
Trim62Q80V85 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Trim62Q80V85 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Trim62Q80V85 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Trim62Q80V85 Gm37847-201ENSMUST00000192163 1497 ntBASIC24.36■■□□□ 1.49
Trim62Q80V85 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.36■■□□□ 1.49
Trim62Q80V85 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trim62Q80V85 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Trim62Q80V85 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Trim62Q80V85 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Trim62Q80V85 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim62Q80V85 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim62Q80V85 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim62Q80V85 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC24.33■■□□□ 1.49
Trim62Q80V85 Gm37136-201ENSMUST00000194368 194 ntBASIC24.33■■□□□ 1.49
Trim62Q80V85 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trim62Q80V85 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Trim62Q80V85 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.32■■□□□ 1.48
Trim62Q80V85 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Trim62Q80V85 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC24.31■■□□□ 1.48
Trim62Q80V85 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Trim62Q80V85 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Trim62Q80V85 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
Trim62Q80V85 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.3■■□□□ 1.48
Trim62Q80V85 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Trim62Q80V85 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Trim62Q80V85 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Trim62Q80V85 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC24.3■■□□□ 1.48
Trim62Q80V85 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Trim62Q80V85 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Trim62Q80V85 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
Trim62Q80V85 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Trim62Q80V85 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC24.29■■□□□ 1.48
Trim62Q80V85 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.29■■□□□ 1.48
Trim62Q80V85 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Trim62Q80V85 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
Trim62Q80V85 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trim62Q80V85 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trim62Q80V85 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Trim62Q80V85 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Trim62Q80V85 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Trim62Q80V85 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Trim62Q80V85 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Trim62Q80V85 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Trim62Q80V85 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Trim62Q80V85 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Trim62Q80V85 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Trim62Q80V85 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
Trim62Q80V85 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Trim62Q80V85 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Trim62Q80V85 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Trim62Q80V85 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Trim62Q80V85 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Trim62Q80V85 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Trim62Q80V85 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.18■■□□□ 1.46
Trim62Q80V85 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.18■■□□□ 1.46
Trim62Q80V85 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Trim62Q80V85 Gm14121-201ENSMUST00000121441 1380 ntBASIC24.16■■□□□ 1.46
Trim62Q80V85 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Trim62Q80V85 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Trim62Q80V85 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Trim62Q80V85 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Trim62Q80V85 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms