Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Gm7432-201ENSMUST00000210343 879 ntBASIC24.57■■□□□ 1.52
Trim62Q80V85 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Trim62Q80V85 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24.56■■□□□ 1.52
Trim62Q80V85 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC24.56■■□□□ 1.52
Trim62Q80V85 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Trim62Q80V85 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Trim62Q80V85 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Trim62Q80V85 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Trim62Q80V85 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Trim62Q80V85 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Trim62Q80V85 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Trim62Q80V85 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.51■■□□□ 1.51
Trim62Q80V85 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Trim62Q80V85 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Trim62Q80V85 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.51■■□□□ 1.51
Trim62Q80V85 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC24.51■■□□□ 1.51
Trim62Q80V85 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.51■■□□□ 1.51
Trim62Q80V85 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.5■■□□□ 1.51
Trim62Q80V85 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trim62Q80V85 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trim62Q80V85 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trim62Q80V85 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Trim62Q80V85 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Trim62Q80V85 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Trim62Q80V85 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC24.47■■□□□ 1.51
Trim62Q80V85 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Trim62Q80V85 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Trim62Q80V85 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trim62Q80V85 Gm11599-201ENSMUST00000118720 878 ntBASIC24.43■■□□□ 1.5
Trim62Q80V85 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trim62Q80V85 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Trim62Q80V85 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.41■■□□□ 1.5
Trim62Q80V85 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Trim62Q80V85 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.4■■□□□ 1.5
Trim62Q80V85 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Trim62Q80V85 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Trim62Q80V85 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Trim62Q80V85 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
Trim62Q80V85 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Trim62Q80V85 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Trim62Q80V85 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Trim62Q80V85 Gm37847-201ENSMUST00000192163 1497 ntBASIC24.36■■□□□ 1.49
Trim62Q80V85 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.36■■□□□ 1.49
Trim62Q80V85 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trim62Q80V85 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Trim62Q80V85 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Trim62Q80V85 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Trim62Q80V85 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim62Q80V85 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim62Q80V85 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim62Q80V85 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC24.33■■□□□ 1.49
Trim62Q80V85 Gm37136-201ENSMUST00000194368 194 ntBASIC24.33■■□□□ 1.49
Trim62Q80V85 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trim62Q80V85 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Trim62Q80V85 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.32■■□□□ 1.48
Trim62Q80V85 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Trim62Q80V85 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC24.31■■□□□ 1.48
Trim62Q80V85 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Trim62Q80V85 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Trim62Q80V85 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
Trim62Q80V85 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.3■■□□□ 1.48
Trim62Q80V85 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Trim62Q80V85 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Trim62Q80V85 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Trim62Q80V85 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC24.3■■□□□ 1.48
Trim62Q80V85 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Trim62Q80V85 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Trim62Q80V85 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
Trim62Q80V85 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Trim62Q80V85 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC24.29■■□□□ 1.48
Trim62Q80V85 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.29■■□□□ 1.48
Trim62Q80V85 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Trim62Q80V85 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
Trim62Q80V85 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trim62Q80V85 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trim62Q80V85 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Trim62Q80V85 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Trim62Q80V85 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Trim62Q80V85 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Trim62Q80V85 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Trim62Q80V85 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Trim62Q80V85 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Trim62Q80V85 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Trim62Q80V85 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Trim62Q80V85 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
Trim62Q80V85 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Trim62Q80V85 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Trim62Q80V85 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Trim62Q80V85 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Trim62Q80V85 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Trim62Q80V85 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Trim62Q80V85 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.18■■□□□ 1.46
Trim62Q80V85 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.18■■□□□ 1.46
Trim62Q80V85 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Trim62Q80V85 Gm14121-201ENSMUST00000121441 1380 ntBASIC24.16■■□□□ 1.46
Trim62Q80V85 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Trim62Q80V85 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Trim62Q80V85 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Trim62Q80V85 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Trim62Q80V85 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms