Protein–RNA interactions for Protein: Q80TR4

Slit1, Slit homolog 1 protein, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slit1Q80TR4 Gm45364-201ENSMUST00000210883 159 ntBASIC31.38■■■□□ 2.61
Slit1Q80TR4 Gm4799-201ENSMUST00000095396 657 ntBASIC31.38■■■□□ 2.61
Slit1Q80TR4 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Slit1Q80TR4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Slit1Q80TR4 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Slit1Q80TR4 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC31.35■■■□□ 2.61
Slit1Q80TR4 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Slit1Q80TR4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
Slit1Q80TR4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
Slit1Q80TR4 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC31.34■■■□□ 2.61
Slit1Q80TR4 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
Slit1Q80TR4 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Slit1Q80TR4 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC31.34■■■□□ 2.61
Slit1Q80TR4 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Slit1Q80TR4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC31.33■■■□□ 2.61
Slit1Q80TR4 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Slit1Q80TR4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Slit1Q80TR4 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
Slit1Q80TR4 Mir3960-201ENSMUST00000198213 73 ntBASIC31.3■■■□□ 2.6
Slit1Q80TR4 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC31.3■■■□□ 2.6
Slit1Q80TR4 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Slit1Q80TR4 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Slit1Q80TR4 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Slit1Q80TR4 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Slit1Q80TR4 Gm37136-201ENSMUST00000194368 194 ntBASIC31.29■■■□□ 2.6
Slit1Q80TR4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Slit1Q80TR4 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC31.28■■■□□ 2.6
Slit1Q80TR4 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Slit1Q80TR4 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Slit1Q80TR4 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Slit1Q80TR4 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.59
Slit1Q80TR4 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Slit1Q80TR4 Gm16437-201ENSMUST00000025669 507 ntBASIC31.25■■■□□ 2.59
Slit1Q80TR4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
Slit1Q80TR4 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Slit1Q80TR4 Gm9905-201ENSMUST00000065740 1845 ntBASIC31.22■■■□□ 2.59
Slit1Q80TR4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Slit1Q80TR4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Slit1Q80TR4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Slit1Q80TR4 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Slit1Q80TR4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Slit1Q80TR4 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC31.19■■■□□ 2.58
Slit1Q80TR4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Slit1Q80TR4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Slit1Q80TR4 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC31.17■■■□□ 2.58
Slit1Q80TR4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC31.16■■■□□ 2.58
Slit1Q80TR4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Slit1Q80TR4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Slit1Q80TR4 Gm27502-201ENSMUST00000183495 199 ntBASIC31.15■■■□□ 2.58
Slit1Q80TR4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC31.15■■■□□ 2.58
Slit1Q80TR4 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Slit1Q80TR4 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Slit1Q80TR4 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
Slit1Q80TR4 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC31.14■■■□□ 2.58
Slit1Q80TR4 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC31.14■■■□□ 2.57
Slit1Q80TR4 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Slit1Q80TR4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC31.13■■■□□ 2.57
Slit1Q80TR4 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Slit1Q80TR4 Gm13889-201ENSMUST00000099689 1386 ntBASIC31.12■■■□□ 2.57
Slit1Q80TR4 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Slit1Q80TR4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Slit1Q80TR4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Slit1Q80TR4 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Slit1Q80TR4 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Slit1Q80TR4 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
Slit1Q80TR4 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Slit1Q80TR4 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Slit1Q80TR4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Slit1Q80TR4 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC31.06■■■□□ 2.56
Slit1Q80TR4 Gm12818-201ENSMUST00000117562 1349 ntBASIC31.05■■■□□ 2.56
Slit1Q80TR4 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Slit1Q80TR4 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC31.04■■■□□ 2.56
Slit1Q80TR4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Slit1Q80TR4 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Slit1Q80TR4 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Slit1Q80TR4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
Slit1Q80TR4 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Slit1Q80TR4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Slit1Q80TR4 Gm7332-201ENSMUST00000118351 454 ntBASIC31.02■■■□□ 2.56
Slit1Q80TR4 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC31.02■■■□□ 2.56
Slit1Q80TR4 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Slit1Q80TR4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC31.02■■■□□ 2.56
Slit1Q80TR4 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
Slit1Q80TR4 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
Slit1Q80TR4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.56
Slit1Q80TR4 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC31.01■■■□□ 2.56
Slit1Q80TR4 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Slit1Q80TR4 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Slit1Q80TR4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC31■■■□□ 2.55
Slit1Q80TR4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC30.99■■■□□ 2.55
Slit1Q80TR4 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Slit1Q80TR4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Slit1Q80TR4 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
Slit1Q80TR4 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Slit1Q80TR4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Slit1Q80TR4 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Slit1Q80TR4 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Slit1Q80TR4 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC30.96■■■□□ 2.55
Slit1Q80TR4 Gm14523-201ENSMUST00000117260 558 ntBASIC30.95■■■□□ 2.55
Slit1Q80TR4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms