Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pif1Q80SX8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pif1Q80SX8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pif1Q80SX8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.76■■□□□ 1.07
Pif1Q80SX8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pif1Q80SX8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.75■■□□□ 1.07
Pif1Q80SX8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Pif1Q80SX8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Pif1Q80SX8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pif1Q80SX8 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pif1Q80SX8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.74■■□□□ 1.07
Pif1Q80SX8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pif1Q80SX8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pif1Q80SX8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Pif1Q80SX8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pif1Q80SX8 Scarna2-201ENSMUST00000157560 414 ntBASIC21.73■■□□□ 1.07
Pif1Q80SX8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.73■■□□□ 1.07
Pif1Q80SX8 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.73■■□□□ 1.07
Pif1Q80SX8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pif1Q80SX8 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.72■■□□□ 1.07
Pif1Q80SX8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pif1Q80SX8 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pif1Q80SX8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.72■■□□□ 1.07
Pif1Q80SX8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pif1Q80SX8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pif1Q80SX8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pif1Q80SX8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pif1Q80SX8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pif1Q80SX8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Pif1Q80SX8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pif1Q80SX8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.71■■□□□ 1.07
Pif1Q80SX8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.71■■□□□ 1.07
Pif1Q80SX8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pif1Q80SX8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.7■■□□□ 1.06
Pif1Q80SX8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pif1Q80SX8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pif1Q80SX8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pif1Q80SX8 Gm4799-201ENSMUST00000095396 657 ntBASIC21.7■■□□□ 1.06
Pif1Q80SX8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pif1Q80SX8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pif1Q80SX8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pif1Q80SX8 Gm11687-201ENSMUST00000118911 886 ntBASIC21.68■■□□□ 1.06
Pif1Q80SX8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pif1Q80SX8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pif1Q80SX8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.67■■□□□ 1.06
Pif1Q80SX8 Gm9806-201ENSMUST00000051080 552 ntBASIC21.67■■□□□ 1.06
Pif1Q80SX8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.67■■□□□ 1.06
Pif1Q80SX8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pif1Q80SX8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pif1Q80SX8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pif1Q80SX8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pif1Q80SX8 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pif1Q80SX8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pif1Q80SX8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.65■■□□□ 1.06
Pif1Q80SX8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Pif1Q80SX8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pif1Q80SX8 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.64■■□□□ 1.05
Pif1Q80SX8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Pif1Q80SX8 Gm16437-201ENSMUST00000025669 507 ntBASIC21.63■■□□□ 1.05
Pif1Q80SX8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pif1Q80SX8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pif1Q80SX8 Mir3960-201ENSMUST00000198213 73 ntBASIC21.62■■□□□ 1.05
Pif1Q80SX8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pif1Q80SX8 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.61■■□□□ 1.05
Pif1Q80SX8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pif1Q80SX8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.61■■□□□ 1.05
Pif1Q80SX8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pif1Q80SX8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pif1Q80SX8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pif1Q80SX8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pif1Q80SX8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pif1Q80SX8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.58■■□□□ 1.05
Pif1Q80SX8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pif1Q80SX8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.58■■□□□ 1.05
Pif1Q80SX8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pif1Q80SX8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pif1Q80SX8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pif1Q80SX8 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.57■■□□□ 1.04
Pif1Q80SX8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pif1Q80SX8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pif1Q80SX8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.56■■□□□ 1.04
Pif1Q80SX8 Gm12366-201ENSMUST00000121722 873 ntBASIC21.56■■□□□ 1.04
Pif1Q80SX8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.56■■□□□ 1.04
Pif1Q80SX8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.56■■□□□ 1.04
Pif1Q80SX8 Gm37136-201ENSMUST00000194368 194 ntBASIC21.56■■□□□ 1.04
Pif1Q80SX8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.56■■□□□ 1.04
Pif1Q80SX8 Gm5786-201ENSMUST00000085368 882 ntBASIC21.56■■□□□ 1.04
Pif1Q80SX8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pif1Q80SX8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.55■■□□□ 1.04
Pif1Q80SX8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pif1Q80SX8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.54■■□□□ 1.04
Pif1Q80SX8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pif1Q80SX8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pif1Q80SX8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pif1Q80SX8 Gm45364-201ENSMUST00000210883 159 ntBASIC21.53■■□□□ 1.04
Pif1Q80SX8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.53■■□□□ 1.04
Pif1Q80SX8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pif1Q80SX8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.51■■□□□ 1.03
Pif1Q80SX8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pif1Q80SX8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms