Protein–RNA interactions for Protein: Q6P7W2

Shkbp1, SH3KBP1-binding protein 1, mousemouse

Predictions only

Length 704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1Q6P7W2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Shkbp1Q6P7W2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC25.07■■□□□ 1.6
Shkbp1Q6P7W2 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Shkbp1Q6P7W2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Shkbp1Q6P7W2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Shkbp1Q6P7W2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Shkbp1Q6P7W2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Shkbp1Q6P7W2 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC25.04■■□□□ 1.6
Shkbp1Q6P7W2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
Shkbp1Q6P7W2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Shkbp1Q6P7W2 Cap2-205ENSMUST00000225824 1634 ntBASIC25.04■■□□□ 1.6
Shkbp1Q6P7W2 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Shkbp1Q6P7W2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC25.03■■□□□ 1.6
Shkbp1Q6P7W2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Shkbp1Q6P7W2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Shkbp1Q6P7W2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Shkbp1Q6P7W2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
Shkbp1Q6P7W2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Shkbp1Q6P7W2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
Shkbp1Q6P7W2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Shkbp1Q6P7W2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
Shkbp1Q6P7W2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Shkbp1Q6P7W2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Shkbp1Q6P7W2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Shkbp1Q6P7W2 Gm37136-201ENSMUST00000194368 194 ntBASIC24.97■■□□□ 1.59
Shkbp1Q6P7W2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Shkbp1Q6P7W2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC24.96■■□□□ 1.59
Shkbp1Q6P7W2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
Shkbp1Q6P7W2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Shkbp1Q6P7W2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC24.95■■□□□ 1.59
Shkbp1Q6P7W2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Shkbp1Q6P7W2 Gm4799-201ENSMUST00000095396 657 ntBASIC24.95■■□□□ 1.58
Shkbp1Q6P7W2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24.95■■□□□ 1.58
Shkbp1Q6P7W2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Shkbp1Q6P7W2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Shkbp1Q6P7W2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Shkbp1Q6P7W2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Shkbp1Q6P7W2 Scarna2-201ENSMUST00000157560 414 ntBASIC24.93■■□□□ 1.58
Shkbp1Q6P7W2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
Shkbp1Q6P7W2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC24.92■■□□□ 1.58
Shkbp1Q6P7W2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.92■■□□□ 1.58
Shkbp1Q6P7W2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.91■■□□□ 1.58
Shkbp1Q6P7W2 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.91■■□□□ 1.58
Shkbp1Q6P7W2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.91■■□□□ 1.58
Shkbp1Q6P7W2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Shkbp1Q6P7W2 Mir3960-201ENSMUST00000198213 73 ntBASIC24.9■■□□□ 1.58
Shkbp1Q6P7W2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Shkbp1Q6P7W2 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.89■■□□□ 1.58
Shkbp1Q6P7W2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Shkbp1Q6P7W2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Shkbp1Q6P7W2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Shkbp1Q6P7W2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.89■■□□□ 1.57
Shkbp1Q6P7W2 Gm45364-201ENSMUST00000210883 159 ntBASIC24.88■■□□□ 1.57
Shkbp1Q6P7W2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
Shkbp1Q6P7W2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Shkbp1Q6P7W2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Shkbp1Q6P7W2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC24.87■■□□□ 1.57
Shkbp1Q6P7W2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24.87■■□□□ 1.57
Shkbp1Q6P7W2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Shkbp1Q6P7W2 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.86■■□□□ 1.57
Shkbp1Q6P7W2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
Shkbp1Q6P7W2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Shkbp1Q6P7W2 Gm9806-201ENSMUST00000051080 552 ntBASIC24.86■■□□□ 1.57
Shkbp1Q6P7W2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Shkbp1Q6P7W2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Shkbp1Q6P7W2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Shkbp1Q6P7W2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Shkbp1Q6P7W2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Shkbp1Q6P7W2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Shkbp1Q6P7W2 Gm11687-201ENSMUST00000118911 886 ntBASIC24.83■■□□□ 1.57
Shkbp1Q6P7W2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC24.83■■□□□ 1.57
Shkbp1Q6P7W2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Shkbp1Q6P7W2 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Shkbp1Q6P7W2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC24.82■■□□□ 1.56
Shkbp1Q6P7W2 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Shkbp1Q6P7W2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Shkbp1Q6P7W2 Gm16437-201ENSMUST00000025669 507 ntBASIC24.81■■□□□ 1.56
Shkbp1Q6P7W2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24.8■■□□□ 1.56
Shkbp1Q6P7W2 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Shkbp1Q6P7W2 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.8■■□□□ 1.56
Shkbp1Q6P7W2 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Shkbp1Q6P7W2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
Shkbp1Q6P7W2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Shkbp1Q6P7W2 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Shkbp1Q6P7W2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
Shkbp1Q6P7W2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Shkbp1Q6P7W2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Shkbp1Q6P7W2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
Shkbp1Q6P7W2 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Shkbp1Q6P7W2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.75■■□□□ 1.55
Shkbp1Q6P7W2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC24.74■■□□□ 1.55
Shkbp1Q6P7W2 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
Shkbp1Q6P7W2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC24.73■■□□□ 1.55
Shkbp1Q6P7W2 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Shkbp1Q6P7W2 Gm12818-201ENSMUST00000117562 1349 ntBASIC24.72■■□□□ 1.55
Shkbp1Q6P7W2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Shkbp1Q6P7W2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Shkbp1Q6P7W2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC24.71■■□□□ 1.55
Shkbp1Q6P7W2 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Shkbp1Q6P7W2 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.71■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms