Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
Ptch1Q61115 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC35.65■■■■□ 3.3
Ptch1Q61115 Mir3960-201ENSMUST00000198213 73 ntBASIC35.65■■■■□ 3.3
Ptch1Q61115 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
Ptch1Q61115 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC35.64■■■■□ 3.3
Ptch1Q61115 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC35.64■■■■□ 3.3
Ptch1Q61115 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC35.64■■■■□ 3.3
Ptch1Q61115 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC35.63■■■■□ 3.29
Ptch1Q61115 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC35.62■■■■□ 3.29
Ptch1Q61115 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC35.62■■■■□ 3.29
Ptch1Q61115 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC35.62■■■■□ 3.29
Ptch1Q61115 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC35.61■■■■□ 3.29
Ptch1Q61115 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
Ptch1Q61115 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
Ptch1Q61115 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC35.59■■■■□ 3.29
Ptch1Q61115 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
Ptch1Q61115 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.29
Ptch1Q61115 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC35.57■■■■□ 3.28
Ptch1Q61115 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
Ptch1Q61115 Gm22567-201ENSMUST00000175542 342 ntBASIC35.57■■■■□ 3.28
Ptch1Q61115 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
Ptch1Q61115 Gm14523-201ENSMUST00000117260 558 ntBASIC35.54■■■■□ 3.28
Ptch1Q61115 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC35.53■■■■□ 3.28
Ptch1Q61115 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC35.53■■■■□ 3.28
Ptch1Q61115 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
Ptch1Q61115 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC35.53■■■■□ 3.28
Ptch1Q61115 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC35.52■■■■□ 3.28
Ptch1Q61115 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28
Ptch1Q61115 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28
Ptch1Q61115 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.27
Ptch1Q61115 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
Ptch1Q61115 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC35.49■■■■□ 3.27
Ptch1Q61115 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC35.49■■■■□ 3.27
Ptch1Q61115 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
Ptch1Q61115 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC35.49■■■■□ 3.27
Ptch1Q61115 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC35.48■■■■□ 3.27
Ptch1Q61115 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC35.47■■■■□ 3.27
Ptch1Q61115 AC151971.4-201ENSMUST00000214717 704 ntBASIC35.47■■■■□ 3.27
Ptch1Q61115 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
Ptch1Q61115 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC35.44■■■■□ 3.26
Ptch1Q61115 Gm5812-201ENSMUST00000061073 957 ntBASIC35.44■■■■□ 3.26
Ptch1Q61115 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC35.42■■■■□ 3.26
Ptch1Q61115 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC35.42■■■■□ 3.26
Ptch1Q61115 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
Ptch1Q61115 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
Ptch1Q61115 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
Ptch1Q61115 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
Ptch1Q61115 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC35.4■■■■□ 3.26
Ptch1Q61115 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
Ptch1Q61115 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
Ptch1Q61115 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC35.38■■■■□ 3.25
Ptch1Q61115 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
Ptch1Q61115 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC35.37■■■■□ 3.25
Ptch1Q61115 Gm37136-201ENSMUST00000194368 194 ntBASIC35.37■■■■□ 3.25
Ptch1Q61115 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC35.37■■■■□ 3.25
Ptch1Q61115 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC35.37■■■■□ 3.25
Ptch1Q61115 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC35.36■■■■□ 3.25
Ptch1Q61115 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC35.35■■■■□ 3.25
Ptch1Q61115 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
Ptch1Q61115 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC35.35■■■■□ 3.25
Ptch1Q61115 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
Ptch1Q61115 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC35.34■■■■□ 3.25
Ptch1Q61115 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC35.34■■■■□ 3.25
Ptch1Q61115 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC35.33■■■■□ 3.25
Ptch1Q61115 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
Ptch1Q61115 Gm13889-201ENSMUST00000099689 1386 ntBASIC35.31■■■■□ 3.24
Ptch1Q61115 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC35.3■■■■□ 3.24
Ptch1Q61115 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
Ptch1Q61115 Gm12818-201ENSMUST00000117562 1349 ntBASIC35.29■■■■□ 3.24
Ptch1Q61115 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
Ptch1Q61115 Gm5067-201ENSMUST00000170449 1009 ntBASIC35.28■■■■□ 3.24
Ptch1Q61115 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
Ptch1Q61115 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC35.27■■■■□ 3.24
Ptch1Q61115 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
Ptch1Q61115 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC35.25■■■■□ 3.23
Ptch1Q61115 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
Ptch1Q61115 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC35.24■■■■□ 3.23
Ptch1Q61115 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC35.24■■■■□ 3.23
Ptch1Q61115 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC35.24■■■■□ 3.23
Ptch1Q61115 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
Ptch1Q61115 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
Ptch1Q61115 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
Ptch1Q61115 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
Ptch1Q61115 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
Ptch1Q61115 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC35.21■■■■□ 3.23
Ptch1Q61115 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC35.2■■■■□ 3.23
Ptch1Q61115 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC35.2■■■■□ 3.23
Ptch1Q61115 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC35.19■■■■□ 3.22
Ptch1Q61115 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
Ptch1Q61115 Gm5921-201ENSMUST00000075898 882 ntBASIC35.19■■■■□ 3.22
Ptch1Q61115 Gm9910-201ENSMUST00000195385 1550 ntBASIC35.19■■■■□ 3.22
Ptch1Q61115 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
Ptch1Q61115 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC35.18■■■■□ 3.22
Ptch1Q61115 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
Ptch1Q61115 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC35.17■■■■□ 3.22
Ptch1Q61115 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
Ptch1Q61115 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC35.16■■■■□ 3.22
Ptch1Q61115 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
Ptch1Q61115 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
Ptch1Q61115 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms