Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Col12a1Q60847 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Col12a1Q60847 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Col12a1Q60847 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC24.32■■□□□ 1.48
Col12a1Q60847 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.32■■□□□ 1.48
Col12a1Q60847 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Col12a1Q60847 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Col12a1Q60847 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Col12a1Q60847 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Col12a1Q60847 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Col12a1Q60847 Gm30023-201ENSMUST00000197970 889 ntBASIC24.3■■□□□ 1.48
Col12a1Q60847 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Col12a1Q60847 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Col12a1Q60847 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Col12a1Q60847 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Col12a1Q60847 Gm15546-201ENSMUST00000122095 826 ntBASIC24.28■■□□□ 1.48
Col12a1Q60847 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC24.28■■□□□ 1.48
Col12a1Q60847 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Col12a1Q60847 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC24.28■■□□□ 1.48
Col12a1Q60847 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Col12a1Q60847 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC24.26■■□□□ 1.47
Col12a1Q60847 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Col12a1Q60847 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
Col12a1Q60847 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC24.26■■□□□ 1.47
Col12a1Q60847 Gm5921-201ENSMUST00000075898 882 ntBASIC24.26■■□□□ 1.47
Col12a1Q60847 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.25■■□□□ 1.47
Col12a1Q60847 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Col12a1Q60847 Gm5067-201ENSMUST00000170449 1009 ntBASIC24.25■■□□□ 1.47
Col12a1Q60847 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Col12a1Q60847 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
Col12a1Q60847 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Col12a1Q60847 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Col12a1Q60847 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC24.23■■□□□ 1.47
Col12a1Q60847 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.23■■□□□ 1.47
Col12a1Q60847 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
Col12a1Q60847 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC24.22■■□□□ 1.47
Col12a1Q60847 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Col12a1Q60847 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Col12a1Q60847 AC093043.1-201ENSMUST00000226700 898 ntBASIC24.2■■□□□ 1.46
Col12a1Q60847 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Col12a1Q60847 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Col12a1Q60847 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Col12a1Q60847 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Col12a1Q60847 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC24.17■■□□□ 1.46
Col12a1Q60847 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Col12a1Q60847 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Col12a1Q60847 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Col12a1Q60847 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Col12a1Q60847 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Col12a1Q60847 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Col12a1Q60847 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Col12a1Q60847 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Col12a1Q60847 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
Col12a1Q60847 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Col12a1Q60847 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.14■■□□□ 1.46
Col12a1Q60847 Gm10420-201ENSMUST00000121713 882 ntBASIC24.14■■□□□ 1.46
Col12a1Q60847 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Col12a1Q60847 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Col12a1Q60847 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Col12a1Q60847 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
Col12a1Q60847 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Col12a1Q60847 Gm5522-201ENSMUST00000189483 1242 ntBASIC24.12■■□□□ 1.45
Col12a1Q60847 AC151971.4-201ENSMUST00000214717 704 ntBASIC24.12■■□□□ 1.45
Col12a1Q60847 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.12■■□□□ 1.45
Col12a1Q60847 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Col12a1Q60847 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC24.1■■□□□ 1.45
Col12a1Q60847 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC24.1■■□□□ 1.45
Col12a1Q60847 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
Col12a1Q60847 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC24.1■■□□□ 1.45
Col12a1Q60847 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.1■■□□□ 1.45
Col12a1Q60847 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Col12a1Q60847 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Col12a1Q60847 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
Col12a1Q60847 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Col12a1Q60847 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.09■■□□□ 1.45
Col12a1Q60847 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
Col12a1Q60847 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Col12a1Q60847 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Col12a1Q60847 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.44
Col12a1Q60847 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Col12a1Q60847 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Col12a1Q60847 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC24.07■■□□□ 1.44
Col12a1Q60847 Gm12818-201ENSMUST00000117562 1349 ntBASIC24.07■■□□□ 1.44
Col12a1Q60847 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Col12a1Q60847 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.06■■□□□ 1.44
Col12a1Q60847 Mir3960-201ENSMUST00000198213 73 ntBASIC24.06■■□□□ 1.44
Col12a1Q60847 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
Col12a1Q60847 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Col12a1Q60847 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Col12a1Q60847 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC24.05■■□□□ 1.44
Col12a1Q60847 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Col12a1Q60847 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Col12a1Q60847 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Col12a1Q60847 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
Col12a1Q60847 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Col12a1Q60847 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC24.03■■□□□ 1.44
Col12a1Q60847 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
Col12a1Q60847 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.03■■□□□ 1.44
Col12a1Q60847 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC24.02■■□□□ 1.44
Col12a1Q60847 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 257.7 ms