Protein–RNA interactions for Protein: Q5U452

Trp53rka, MCG14616, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trp53rkaQ5U452 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trp53rkaQ5U452 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trp53rkaQ5U452 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.43■□□□□ 0.54
Trp53rkaQ5U452 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.43■□□□□ 0.54
Trp53rkaQ5U452 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trp53rkaQ5U452 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trp53rkaQ5U452 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trp53rkaQ5U452 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trp53rkaQ5U452 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trp53rkaQ5U452 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.42■□□□□ 0.54
Trp53rkaQ5U452 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trp53rkaQ5U452 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trp53rkaQ5U452 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trp53rkaQ5U452 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trp53rkaQ5U452 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trp53rkaQ5U452 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trp53rkaQ5U452 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trp53rkaQ5U452 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
Trp53rkaQ5U452 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.39■□□□□ 0.53
Trp53rkaQ5U452 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trp53rkaQ5U452 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trp53rkaQ5U452 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Trp53rkaQ5U452 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trp53rkaQ5U452 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trp53rkaQ5U452 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trp53rkaQ5U452 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trp53rkaQ5U452 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trp53rkaQ5U452 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Trp53rkaQ5U452 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC18.37■□□□□ 0.53
Trp53rkaQ5U452 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trp53rkaQ5U452 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trp53rkaQ5U452 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trp53rkaQ5U452 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trp53rkaQ5U452 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trp53rkaQ5U452 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trp53rkaQ5U452 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trp53rkaQ5U452 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Trp53rkaQ5U452 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trp53rkaQ5U452 Gm8109-201ENSMUST00000194076 746 ntBASIC18.35■□□□□ 0.53
Trp53rkaQ5U452 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.35■□□□□ 0.53
Trp53rkaQ5U452 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trp53rkaQ5U452 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trp53rkaQ5U452 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trp53rkaQ5U452 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Trp53rkaQ5U452 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trp53rkaQ5U452 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.33■□□□□ 0.52
Trp53rkaQ5U452 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trp53rkaQ5U452 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.33■□□□□ 0.52
Trp53rkaQ5U452 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trp53rkaQ5U452 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trp53rkaQ5U452 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trp53rkaQ5U452 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trp53rkaQ5U452 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trp53rkaQ5U452 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trp53rkaQ5U452 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trp53rkaQ5U452 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trp53rkaQ5U452 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trp53rkaQ5U452 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trp53rkaQ5U452 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trp53rkaQ5U452 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trp53rkaQ5U452 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Trp53rkaQ5U452 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trp53rkaQ5U452 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trp53rkaQ5U452 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.29■□□□□ 0.52
Trp53rkaQ5U452 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.28■□□□□ 0.52
Trp53rkaQ5U452 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.28■□□□□ 0.52
Trp53rkaQ5U452 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Trp53rkaQ5U452 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Trp53rkaQ5U452 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trp53rkaQ5U452 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trp53rkaQ5U452 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trp53rkaQ5U452 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trp53rkaQ5U452 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Trp53rkaQ5U452 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trp53rkaQ5U452 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.26■□□□□ 0.51
Trp53rkaQ5U452 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trp53rkaQ5U452 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Trp53rkaQ5U452 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Trp53rkaQ5U452 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trp53rkaQ5U452 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trp53rkaQ5U452 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trp53rkaQ5U452 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trp53rkaQ5U452 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trp53rkaQ5U452 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Trp53rkaQ5U452 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
Trp53rkaQ5U452 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Trp53rkaQ5U452 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trp53rkaQ5U452 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.23■□□□□ 0.51
Trp53rkaQ5U452 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trp53rkaQ5U452 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trp53rkaQ5U452 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Trp53rkaQ5U452 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trp53rkaQ5U452 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trp53rkaQ5U452 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.22■□□□□ 0.51
Trp53rkaQ5U452 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trp53rkaQ5U452 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trp53rkaQ5U452 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trp53rkaQ5U452 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trp53rkaQ5U452 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trp53rkaQ5U452 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms