Protein–RNA interactions for Protein: Q5TIS6

Noto, Homeobox protein notochord, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NotoQ5TIS6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.35■□□□□ 0.69
NotoQ5TIS6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NotoQ5TIS6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NotoQ5TIS6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
NotoQ5TIS6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
NotoQ5TIS6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
NotoQ5TIS6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
NotoQ5TIS6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NotoQ5TIS6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NotoQ5TIS6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NotoQ5TIS6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NotoQ5TIS6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
NotoQ5TIS6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.33■□□□□ 0.68
NotoQ5TIS6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NotoQ5TIS6 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.33■□□□□ 0.68
NotoQ5TIS6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
NotoQ5TIS6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NotoQ5TIS6 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
NotoQ5TIS6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NotoQ5TIS6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NotoQ5TIS6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NotoQ5TIS6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.31■□□□□ 0.68
NotoQ5TIS6 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NotoQ5TIS6 Particl-201ENSMUST00000205370 1560 ntBASIC19.31■□□□□ 0.68
NotoQ5TIS6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NotoQ5TIS6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
NotoQ5TIS6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NotoQ5TIS6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NotoQ5TIS6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NotoQ5TIS6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NotoQ5TIS6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
NotoQ5TIS6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NotoQ5TIS6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NotoQ5TIS6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NotoQ5TIS6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NotoQ5TIS6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NotoQ5TIS6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NotoQ5TIS6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
NotoQ5TIS6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NotoQ5TIS6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NotoQ5TIS6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NotoQ5TIS6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NotoQ5TIS6 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.26■□□□□ 0.67
NotoQ5TIS6 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.26■□□□□ 0.67
NotoQ5TIS6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NotoQ5TIS6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NotoQ5TIS6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.25■□□□□ 0.67
NotoQ5TIS6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.25■□□□□ 0.67
NotoQ5TIS6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NotoQ5TIS6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
NotoQ5TIS6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NotoQ5TIS6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NotoQ5TIS6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NotoQ5TIS6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NotoQ5TIS6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NotoQ5TIS6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
NotoQ5TIS6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NotoQ5TIS6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NotoQ5TIS6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NotoQ5TIS6 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NotoQ5TIS6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NotoQ5TIS6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NotoQ5TIS6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NotoQ5TIS6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NotoQ5TIS6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NotoQ5TIS6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
NotoQ5TIS6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NotoQ5TIS6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NotoQ5TIS6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NotoQ5TIS6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
NotoQ5TIS6 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NotoQ5TIS6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NotoQ5TIS6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NotoQ5TIS6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NotoQ5TIS6 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NotoQ5TIS6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
NotoQ5TIS6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.16■□□□□ 0.66
NotoQ5TIS6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NotoQ5TIS6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NotoQ5TIS6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NotoQ5TIS6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
NotoQ5TIS6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NotoQ5TIS6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NotoQ5TIS6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NotoQ5TIS6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.15■□□□□ 0.66
NotoQ5TIS6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.15■□□□□ 0.66
NotoQ5TIS6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NotoQ5TIS6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
NotoQ5TIS6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NotoQ5TIS6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NotoQ5TIS6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NotoQ5TIS6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NotoQ5TIS6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NotoQ5TIS6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NotoQ5TIS6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
NotoQ5TIS6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NotoQ5TIS6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NotoQ5TIS6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
NotoQ5TIS6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
NotoQ5TIS6 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms