Protein–RNA interactions for Protein: Q5SSA0

Vmn1r223, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r223Q5SSA0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.39■□□□□ 0.85
Vmn1r223Q5SSA0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.39■□□□□ 0.85
Vmn1r223Q5SSA0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vmn1r223Q5SSA0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.38■□□□□ 0.85
Vmn1r223Q5SSA0 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Vmn1r223Q5SSA0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Vmn1r223Q5SSA0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vmn1r223Q5SSA0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Vmn1r223Q5SSA0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.37■□□□□ 0.85
Vmn1r223Q5SSA0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vmn1r223Q5SSA0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vmn1r223Q5SSA0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vmn1r223Q5SSA0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Vmn1r223Q5SSA0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Vmn1r223Q5SSA0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Vmn1r223Q5SSA0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Vmn1r223Q5SSA0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Vmn1r223Q5SSA0 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vmn1r223Q5SSA0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Vmn1r223Q5SSA0 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vmn1r223Q5SSA0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vmn1r223Q5SSA0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vmn1r223Q5SSA0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.33■□□□□ 0.85
Vmn1r223Q5SSA0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vmn1r223Q5SSA0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vmn1r223Q5SSA0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vmn1r223Q5SSA0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Vmn1r223Q5SSA0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vmn1r223Q5SSA0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vmn1r223Q5SSA0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
Vmn1r223Q5SSA0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vmn1r223Q5SSA0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.31■□□□□ 0.84
Vmn1r223Q5SSA0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.31■□□□□ 0.84
Vmn1r223Q5SSA0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vmn1r223Q5SSA0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Vmn1r223Q5SSA0 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vmn1r223Q5SSA0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vmn1r223Q5SSA0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vmn1r223Q5SSA0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vmn1r223Q5SSA0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.3■□□□□ 0.84
Vmn1r223Q5SSA0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.3■□□□□ 0.84
Vmn1r223Q5SSA0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vmn1r223Q5SSA0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Vmn1r223Q5SSA0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vmn1r223Q5SSA0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Vmn1r223Q5SSA0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Vmn1r223Q5SSA0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Vmn1r223Q5SSA0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vmn1r223Q5SSA0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Vmn1r223Q5SSA0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.84
Vmn1r223Q5SSA0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Vmn1r223Q5SSA0 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vmn1r223Q5SSA0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vmn1r223Q5SSA0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Vmn1r223Q5SSA0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vmn1r223Q5SSA0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vmn1r223Q5SSA0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Vmn1r223Q5SSA0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vmn1r223Q5SSA0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.25■□□□□ 0.83
Vmn1r223Q5SSA0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vmn1r223Q5SSA0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vmn1r223Q5SSA0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vmn1r223Q5SSA0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vmn1r223Q5SSA0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Vmn1r223Q5SSA0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
Vmn1r223Q5SSA0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vmn1r223Q5SSA0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vmn1r223Q5SSA0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Vmn1r223Q5SSA0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Vmn1r223Q5SSA0 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vmn1r223Q5SSA0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Vmn1r223Q5SSA0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.21■□□□□ 0.83
Vmn1r223Q5SSA0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vmn1r223Q5SSA0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.21■□□□□ 0.83
Vmn1r223Q5SSA0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vmn1r223Q5SSA0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vmn1r223Q5SSA0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vmn1r223Q5SSA0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vmn1r223Q5SSA0 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vmn1r223Q5SSA0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vmn1r223Q5SSA0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vmn1r223Q5SSA0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Vmn1r223Q5SSA0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vmn1r223Q5SSA0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Vmn1r223Q5SSA0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Vmn1r223Q5SSA0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
Vmn1r223Q5SSA0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vmn1r223Q5SSA0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Vmn1r223Q5SSA0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vmn1r223Q5SSA0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vmn1r223Q5SSA0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vmn1r223Q5SSA0 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vmn1r223Q5SSA0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vmn1r223Q5SSA0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vmn1r223Q5SSA0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vmn1r223Q5SSA0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.14■□□□□ 0.81
Vmn1r223Q5SSA0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
Vmn1r223Q5SSA0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.13■□□□□ 0.81
Vmn1r223Q5SSA0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Vmn1r223Q5SSA0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms