Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav3-3Q5R1C3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav3-3Q5R1C3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Trav3-3Q5R1C3 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC17.55■□□□□ 0.4
Trav3-3Q5R1C3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav3-3Q5R1C3 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Trav3-3Q5R1C3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav3-3Q5R1C3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav3-3Q5R1C3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav3-3Q5R1C3 AC166822.3-201ENSMUST00000227394 661 ntBASIC17.54■□□□□ 0.4
Trav3-3Q5R1C3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav3-3Q5R1C3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Trav3-3Q5R1C3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav3-3Q5R1C3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav3-3Q5R1C3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav3-3Q5R1C3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav3-3Q5R1C3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.52■□□□□ 0.4
Trav3-3Q5R1C3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.52■□□□□ 0.4
Trav3-3Q5R1C3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Trav3-3Q5R1C3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav3-3Q5R1C3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav3-3Q5R1C3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav3-3Q5R1C3 Gm27322-201ENSMUST00000184007 104 ntBASIC17.51■□□□□ 0.39
Trav3-3Q5R1C3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC17.51■□□□□ 0.39
Trav3-3Q5R1C3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav3-3Q5R1C3 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.51■□□□□ 0.39
Trav3-3Q5R1C3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav3-3Q5R1C3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trav3-3Q5R1C3 Notumos-201ENSMUST00000151998 2659 ntBASIC17.5■□□□□ 0.39
Trav3-3Q5R1C3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.5■□□□□ 0.39
Trav3-3Q5R1C3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav3-3Q5R1C3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav3-3Q5R1C3 Gm17082-201ENSMUST00000166043 1091 ntBASIC17.49■□□□□ 0.39
Trav3-3Q5R1C3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav3-3Q5R1C3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav3-3Q5R1C3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Trav3-3Q5R1C3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav3-3Q5R1C3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav3-3Q5R1C3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Trav3-3Q5R1C3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav3-3Q5R1C3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav3-3Q5R1C3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav3-3Q5R1C3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav3-3Q5R1C3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
Trav3-3Q5R1C3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav3-3Q5R1C3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav3-3Q5R1C3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
Trav3-3Q5R1C3 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav3-3Q5R1C3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav3-3Q5R1C3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trav3-3Q5R1C3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
Trav3-3Q5R1C3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav3-3Q5R1C3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.46■□□□□ 0.39
Trav3-3Q5R1C3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Trav3-3Q5R1C3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav3-3Q5R1C3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trav3-3Q5R1C3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav3-3Q5R1C3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav3-3Q5R1C3 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav3-3Q5R1C3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav3-3Q5R1C3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Trav3-3Q5R1C3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav3-3Q5R1C3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav3-3Q5R1C3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav3-3Q5R1C3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav3-3Q5R1C3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Trav3-3Q5R1C3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav3-3Q5R1C3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav3-3Q5R1C3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav3-3Q5R1C3 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav3-3Q5R1C3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trav3-3Q5R1C3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trav3-3Q5R1C3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trav3-3Q5R1C3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav3-3Q5R1C3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav3-3Q5R1C3 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav3-3Q5R1C3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav3-3Q5R1C3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav3-3Q5R1C3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trav3-3Q5R1C3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav3-3Q5R1C3 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav3-3Q5R1C3 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav3-3Q5R1C3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav3-3Q5R1C3 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.4■□□□□ 0.38
Trav3-3Q5R1C3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Trav3-3Q5R1C3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav3-3Q5R1C3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav3-3Q5R1C3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav3-3Q5R1C3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav3-3Q5R1C3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav3-3Q5R1C3 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav3-3Q5R1C3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav3-3Q5R1C3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC17.37■□□□□ 0.37
Trav3-3Q5R1C3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.37■□□□□ 0.37
Trav3-3Q5R1C3 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav3-3Q5R1C3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav3-3Q5R1C3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav3-3Q5R1C3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Trav3-3Q5R1C3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav3-3Q5R1C3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms