Protein–RNA interactions for Protein: Q3V0X1

Smim9, Small integral membrane protein 9, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim9Q3V0X1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smim9Q3V0X1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smim9Q3V0X1 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smim9Q3V0X1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Smim9Q3V0X1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smim9Q3V0X1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smim9Q3V0X1 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smim9Q3V0X1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smim9Q3V0X1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smim9Q3V0X1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smim9Q3V0X1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smim9Q3V0X1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Smim9Q3V0X1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Smim9Q3V0X1 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Smim9Q3V0X1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smim9Q3V0X1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.03■□□□□ 0.48
Smim9Q3V0X1 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Smim9Q3V0X1 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smim9Q3V0X1 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smim9Q3V0X1 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.02■□□□□ 0.48
Smim9Q3V0X1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Smim9Q3V0X1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Smim9Q3V0X1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smim9Q3V0X1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smim9Q3V0X1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Smim9Q3V0X1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.01■□□□□ 0.47
Smim9Q3V0X1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Smim9Q3V0X1 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Smim9Q3V0X1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smim9Q3V0X1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Smim9Q3V0X1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smim9Q3V0X1 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smim9Q3V0X1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18■□□□□ 0.47
Smim9Q3V0X1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Smim9Q3V0X1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Smim9Q3V0X1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Smim9Q3V0X1 Gm27322-201ENSMUST00000184007 104 ntBASIC17.99■□□□□ 0.47
Smim9Q3V0X1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smim9Q3V0X1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smim9Q3V0X1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smim9Q3V0X1 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smim9Q3V0X1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
Smim9Q3V0X1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smim9Q3V0X1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smim9Q3V0X1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smim9Q3V0X1 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smim9Q3V0X1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Smim9Q3V0X1 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Smim9Q3V0X1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smim9Q3V0X1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
Smim9Q3V0X1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Smim9Q3V0X1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smim9Q3V0X1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Smim9Q3V0X1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Smim9Q3V0X1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.96■□□□□ 0.47
Smim9Q3V0X1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Smim9Q3V0X1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smim9Q3V0X1 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smim9Q3V0X1 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Smim9Q3V0X1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Smim9Q3V0X1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smim9Q3V0X1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smim9Q3V0X1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smim9Q3V0X1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC17.95■□□□□ 0.46
Smim9Q3V0X1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Smim9Q3V0X1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Smim9Q3V0X1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.94■□□□□ 0.46
Smim9Q3V0X1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Smim9Q3V0X1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smim9Q3V0X1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Smim9Q3V0X1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Smim9Q3V0X1 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smim9Q3V0X1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smim9Q3V0X1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.93■□□□□ 0.46
Smim9Q3V0X1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Smim9Q3V0X1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smim9Q3V0X1 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Smim9Q3V0X1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smim9Q3V0X1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smim9Q3V0X1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smim9Q3V0X1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smim9Q3V0X1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smim9Q3V0X1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smim9Q3V0X1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smim9Q3V0X1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smim9Q3V0X1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smim9Q3V0X1 Gm25262-201ENSMUST00000174934 133 ntBASIC17.91■□□□□ 0.46
Smim9Q3V0X1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Smim9Q3V0X1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC17.91■□□□□ 0.46
Smim9Q3V0X1 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Smim9Q3V0X1 Gm17082-201ENSMUST00000166043 1091 ntBASIC17.9■□□□□ 0.46
Smim9Q3V0X1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smim9Q3V0X1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Smim9Q3V0X1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smim9Q3V0X1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smim9Q3V0X1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smim9Q3V0X1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smim9Q3V0X1 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Smim9Q3V0X1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smim9Q3V0X1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms