Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Trim80Q3V061 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Trim80Q3V061 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC23.93■■□□□ 1.42
Trim80Q3V061 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Trim80Q3V061 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Trim80Q3V061 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.91■■□□□ 1.42
Trim80Q3V061 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.91■■□□□ 1.42
Trim80Q3V061 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Trim80Q3V061 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Trim80Q3V061 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Trim80Q3V061 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
Trim80Q3V061 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Trim80Q3V061 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Trim80Q3V061 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Trim80Q3V061 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Trim80Q3V061 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Trim80Q3V061 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Trim80Q3V061 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Trim80Q3V061 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Trim80Q3V061 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
Trim80Q3V061 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
Trim80Q3V061 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Trim80Q3V061 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Trim80Q3V061 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Trim80Q3V061 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Trim80Q3V061 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.86■■□□□ 1.41
Trim80Q3V061 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Trim80Q3V061 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Trim80Q3V061 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Trim80Q3V061 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Trim80Q3V061 Gm9939-201ENSMUST00000067161 1154 ntBASIC23.85■■□□□ 1.41
Trim80Q3V061 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Trim80Q3V061 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Trim80Q3V061 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trim80Q3V061 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trim80Q3V061 Gm8503-201ENSMUST00000118131 455 ntBASIC23.84■■□□□ 1.41
Trim80Q3V061 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
Trim80Q3V061 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Trim80Q3V061 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trim80Q3V061 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
Trim80Q3V061 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Trim80Q3V061 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC23.83■■□□□ 1.41
Trim80Q3V061 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Trim80Q3V061 Gm20634-201ENSMUST00000090779 2956 ntBASIC23.82■■□□□ 1.4
Trim80Q3V061 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.82■■□□□ 1.4
Trim80Q3V061 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trim80Q3V061 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trim80Q3V061 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Trim80Q3V061 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trim80Q3V061 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trim80Q3V061 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trim80Q3V061 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.8■■□□□ 1.4
Trim80Q3V061 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim80Q3V061 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.79■■□□□ 1.4
Trim80Q3V061 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Trim80Q3V061 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim80Q3V061 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim80Q3V061 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Trim80Q3V061 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim80Q3V061 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Trim80Q3V061 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Trim80Q3V061 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim80Q3V061 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Trim80Q3V061 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim80Q3V061 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Trim80Q3V061 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim80Q3V061 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Trim80Q3V061 Gm17641-201ENSMUST00000166328 2350 ntBASIC23.76■■□□□ 1.39
Trim80Q3V061 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC23.75■■□□□ 1.39
Trim80Q3V061 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Trim80Q3V061 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Trim80Q3V061 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Trim80Q3V061 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trim80Q3V061 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Trim80Q3V061 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.74■■□□□ 1.39
Trim80Q3V061 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trim80Q3V061 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim80Q3V061 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Trim80Q3V061 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim80Q3V061 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim80Q3V061 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC23.72■■□□□ 1.39
Trim80Q3V061 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Trim80Q3V061 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.7■■□□□ 1.39
Trim80Q3V061 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Trim80Q3V061 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC23.69■■□□□ 1.38
Trim80Q3V061 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim80Q3V061 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim80Q3V061 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim80Q3V061 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim80Q3V061 Gm6821-201ENSMUST00000107540 542 ntBASIC23.69■■□□□ 1.38
Trim80Q3V061 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.69■■□□□ 1.38
Trim80Q3V061 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim80Q3V061 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim80Q3V061 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim80Q3V061 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim80Q3V061 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim80Q3V061 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Trim80Q3V061 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trim80Q3V061 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.67■■□□□ 1.38
Trim80Q3V061 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 119 ms