Protein–RNA interactions for Protein: Q3UHC1

Rapgef1, Rap guanine nucleotide exchange factor (GEF) 1, mousemouse

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rapgef1Q3UHC1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
Rapgef1Q3UHC1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Rapgef1Q3UHC1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
Rapgef1Q3UHC1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Rapgef1Q3UHC1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC25.6■■□□□ 1.69
Rapgef1Q3UHC1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.6■■□□□ 1.69
Rapgef1Q3UHC1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Rapgef1Q3UHC1 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC25.6■■□□□ 1.69
Rapgef1Q3UHC1 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Rapgef1Q3UHC1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Rapgef1Q3UHC1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.59■■□□□ 1.69
Rapgef1Q3UHC1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Rapgef1Q3UHC1 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Rapgef1Q3UHC1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
Rapgef1Q3UHC1 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
Rapgef1Q3UHC1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
Rapgef1Q3UHC1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
Rapgef1Q3UHC1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Rapgef1Q3UHC1 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
Rapgef1Q3UHC1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC25.57■■□□□ 1.68
Rapgef1Q3UHC1 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Rapgef1Q3UHC1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC25.56■■□□□ 1.68
Rapgef1Q3UHC1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Rapgef1Q3UHC1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
Rapgef1Q3UHC1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
Rapgef1Q3UHC1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Rapgef1Q3UHC1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC25.56■■□□□ 1.68
Rapgef1Q3UHC1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC25.55■■□□□ 1.68
Rapgef1Q3UHC1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC25.55■■□□□ 1.68
Rapgef1Q3UHC1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Rapgef1Q3UHC1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Rapgef1Q3UHC1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Rapgef1Q3UHC1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Rapgef1Q3UHC1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Rapgef1Q3UHC1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Rapgef1Q3UHC1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Rapgef1Q3UHC1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC25.52■■□□□ 1.68
Rapgef1Q3UHC1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Rapgef1Q3UHC1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Rapgef1Q3UHC1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Rapgef1Q3UHC1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Rapgef1Q3UHC1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Rapgef1Q3UHC1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Rapgef1Q3UHC1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Rapgef1Q3UHC1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
Rapgef1Q3UHC1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Rapgef1Q3UHC1 Gm30023-201ENSMUST00000197970 889 ntBASIC25.48■■□□□ 1.67
Rapgef1Q3UHC1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
Rapgef1Q3UHC1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.48■■□□□ 1.67
Rapgef1Q3UHC1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Rapgef1Q3UHC1 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
Rapgef1Q3UHC1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
Rapgef1Q3UHC1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
Rapgef1Q3UHC1 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Rapgef1Q3UHC1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
Rapgef1Q3UHC1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25.43■■□□□ 1.66
Rapgef1Q3UHC1 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rapgef1Q3UHC1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rapgef1Q3UHC1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25.42■■□□□ 1.66
Rapgef1Q3UHC1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC25.42■■□□□ 1.66
Rapgef1Q3UHC1 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Rapgef1Q3UHC1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rapgef1Q3UHC1 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rapgef1Q3UHC1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rapgef1Q3UHC1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC25.41■■□□□ 1.66
Rapgef1Q3UHC1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Rapgef1Q3UHC1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Rapgef1Q3UHC1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rapgef1Q3UHC1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Rapgef1Q3UHC1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC25.4■■□□□ 1.66
Rapgef1Q3UHC1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Rapgef1Q3UHC1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Rapgef1Q3UHC1 Gm7432-201ENSMUST00000210343 879 ntBASIC25.4■■□□□ 1.66
Rapgef1Q3UHC1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rapgef1Q3UHC1 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Rapgef1Q3UHC1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Rapgef1Q3UHC1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC25.37■■□□□ 1.65
Rapgef1Q3UHC1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.37■■□□□ 1.65
Rapgef1Q3UHC1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Rapgef1Q3UHC1 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rapgef1Q3UHC1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Rapgef1Q3UHC1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Rapgef1Q3UHC1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.36■■□□□ 1.65
Rapgef1Q3UHC1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Rapgef1Q3UHC1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC25.36■■□□□ 1.65
Rapgef1Q3UHC1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Rapgef1Q3UHC1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Rapgef1Q3UHC1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Rapgef1Q3UHC1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Rapgef1Q3UHC1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Rapgef1Q3UHC1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC25.34■■□□□ 1.65
Rapgef1Q3UHC1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Rapgef1Q3UHC1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
Rapgef1Q3UHC1 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rapgef1Q3UHC1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25.31■■□□□ 1.64
Rapgef1Q3UHC1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Rapgef1Q3UHC1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rapgef1Q3UHC1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rapgef1Q3UHC1 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Rapgef1Q3UHC1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms