Protein–RNA interactions for Protein: Q3U2C5

Rnf149, E3 ubiquitin-protein ligase RNF149, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf149Q3U2C5 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf149Q3U2C5 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf149Q3U2C5 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf149Q3U2C5 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf149Q3U2C5 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf149Q3U2C5 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Rnf149Q3U2C5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf149Q3U2C5 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf149Q3U2C5 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Rnf149Q3U2C5 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf149Q3U2C5 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf149Q3U2C5 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf149Q3U2C5 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf149Q3U2C5 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf149Q3U2C5 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf149Q3U2C5 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Rnf149Q3U2C5 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.92■□□□□ 0.94
Rnf149Q3U2C5 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf149Q3U2C5 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.91■□□□□ 0.94
Rnf149Q3U2C5 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf149Q3U2C5 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Rnf149Q3U2C5 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf149Q3U2C5 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf149Q3U2C5 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf149Q3U2C5 Gm24970-201ENSMUST00000175582 82 ntBASIC20.89■□□□□ 0.93
Rnf149Q3U2C5 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Rnf149Q3U2C5 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf149Q3U2C5 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf149Q3U2C5 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf149Q3U2C5 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf149Q3U2C5 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf149Q3U2C5 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
Rnf149Q3U2C5 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf149Q3U2C5 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.87■□□□□ 0.93
Rnf149Q3U2C5 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf149Q3U2C5 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf149Q3U2C5 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf149Q3U2C5 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf149Q3U2C5 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.86■□□□□ 0.93
Rnf149Q3U2C5 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.86■□□□□ 0.93
Rnf149Q3U2C5 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf149Q3U2C5 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Rnf149Q3U2C5 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Rnf149Q3U2C5 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf149Q3U2C5 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf149Q3U2C5 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.85■□□□□ 0.93
Rnf149Q3U2C5 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf149Q3U2C5 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.83■□□□□ 0.93
Rnf149Q3U2C5 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf149Q3U2C5 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Rnf149Q3U2C5 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rnf149Q3U2C5 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rnf149Q3U2C5 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Rnf149Q3U2C5 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf149Q3U2C5 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.82■□□□□ 0.92
Rnf149Q3U2C5 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf149Q3U2C5 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf149Q3U2C5 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Rnf149Q3U2C5 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf149Q3U2C5 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf149Q3U2C5 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf149Q3U2C5 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.8■□□□□ 0.92
Rnf149Q3U2C5 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf149Q3U2C5 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf149Q3U2C5 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf149Q3U2C5 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.79■□□□□ 0.92
Rnf149Q3U2C5 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf149Q3U2C5 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf149Q3U2C5 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf149Q3U2C5 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.78■□□□□ 0.92
Rnf149Q3U2C5 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf149Q3U2C5 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf149Q3U2C5 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Rnf149Q3U2C5 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Rnf149Q3U2C5 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf149Q3U2C5 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Rnf149Q3U2C5 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf149Q3U2C5 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf149Q3U2C5 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.76■□□□□ 0.91
Rnf149Q3U2C5 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.76■□□□□ 0.91
Rnf149Q3U2C5 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf149Q3U2C5 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Rnf149Q3U2C5 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf149Q3U2C5 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf149Q3U2C5 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.74■□□□□ 0.91
Rnf149Q3U2C5 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Rnf149Q3U2C5 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Rnf149Q3U2C5 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.74■□□□□ 0.91
Rnf149Q3U2C5 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Rnf149Q3U2C5 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
Rnf149Q3U2C5 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.72■□□□□ 0.91
Rnf149Q3U2C5 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Rnf149Q3U2C5 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf149Q3U2C5 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.72■□□□□ 0.91
Rnf149Q3U2C5 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf149Q3U2C5 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Rnf149Q3U2C5 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf149Q3U2C5 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Rnf149Q3U2C5 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf149Q3U2C5 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms