Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Shcbp1lQ3TTP0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.7■■□□□ 1.38
Shcbp1lQ3TTP0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Shcbp1lQ3TTP0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Shcbp1lQ3TTP0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Shcbp1lQ3TTP0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.69■■□□□ 1.38
Shcbp1lQ3TTP0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.69■■□□□ 1.38
Shcbp1lQ3TTP0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Shcbp1lQ3TTP0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Shcbp1lQ3TTP0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.66■■□□□ 1.38
Shcbp1lQ3TTP0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Shcbp1lQ3TTP0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Shcbp1lQ3TTP0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.66■■□□□ 1.38
Shcbp1lQ3TTP0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Shcbp1lQ3TTP0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
Shcbp1lQ3TTP0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Shcbp1lQ3TTP0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Shcbp1lQ3TTP0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Shcbp1lQ3TTP0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Shcbp1lQ3TTP0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Shcbp1lQ3TTP0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Shcbp1lQ3TTP0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Shcbp1lQ3TTP0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Shcbp1lQ3TTP0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Shcbp1lQ3TTP0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Shcbp1lQ3TTP0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.61■■□□□ 1.37
Shcbp1lQ3TTP0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Shcbp1lQ3TTP0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.6■■□□□ 1.37
Shcbp1lQ3TTP0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Shcbp1lQ3TTP0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.59■■□□□ 1.37
Shcbp1lQ3TTP0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.59■■□□□ 1.37
Shcbp1lQ3TTP0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Shcbp1lQ3TTP0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Shcbp1lQ3TTP0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Shcbp1lQ3TTP0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.58■■□□□ 1.36
Shcbp1lQ3TTP0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
Shcbp1lQ3TTP0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Shcbp1lQ3TTP0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.56■■□□□ 1.36
Shcbp1lQ3TTP0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.56■■□□□ 1.36
Shcbp1lQ3TTP0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Shcbp1lQ3TTP0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
Shcbp1lQ3TTP0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Shcbp1lQ3TTP0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Shcbp1lQ3TTP0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Shcbp1lQ3TTP0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Shcbp1lQ3TTP0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
Shcbp1lQ3TTP0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
Shcbp1lQ3TTP0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Shcbp1lQ3TTP0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Shcbp1lQ3TTP0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Shcbp1lQ3TTP0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
Shcbp1lQ3TTP0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Shcbp1lQ3TTP0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Shcbp1lQ3TTP0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.35
Shcbp1lQ3TTP0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Shcbp1lQ3TTP0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23.51■■□□□ 1.35
Shcbp1lQ3TTP0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Shcbp1lQ3TTP0 Gm6311-201ENSMUST00000073790 878 ntBASIC23.51■■□□□ 1.35
Shcbp1lQ3TTP0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Shcbp1lQ3TTP0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.5■■□□□ 1.35
Shcbp1lQ3TTP0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Shcbp1lQ3TTP0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
Shcbp1lQ3TTP0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Shcbp1lQ3TTP0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Shcbp1lQ3TTP0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
Shcbp1lQ3TTP0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.48■■□□□ 1.35
Shcbp1lQ3TTP0 Amer2-203ENSMUST00000225247 2662 ntBASIC23.48■■□□□ 1.35
Shcbp1lQ3TTP0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.47■■□□□ 1.35
Shcbp1lQ3TTP0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
Shcbp1lQ3TTP0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Shcbp1lQ3TTP0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Shcbp1lQ3TTP0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.44■■□□□ 1.34
Shcbp1lQ3TTP0 Gm37136-201ENSMUST00000194368 194 ntBASIC23.44■■□□□ 1.34
Shcbp1lQ3TTP0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Shcbp1lQ3TTP0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC23.43■■□□□ 1.34
Shcbp1lQ3TTP0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.43■■□□□ 1.34
Shcbp1lQ3TTP0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Shcbp1lQ3TTP0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
Shcbp1lQ3TTP0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Shcbp1lQ3TTP0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
Shcbp1lQ3TTP0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
Shcbp1lQ3TTP0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Shcbp1lQ3TTP0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.42■■□□□ 1.34
Shcbp1lQ3TTP0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
Shcbp1lQ3TTP0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Shcbp1lQ3TTP0 Mir6538-201ENSMUST00000183713 110 ntBASIC23.41■■□□□ 1.34
Shcbp1lQ3TTP0 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Shcbp1lQ3TTP0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Shcbp1lQ3TTP0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Shcbp1lQ3TTP0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Shcbp1lQ3TTP0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Shcbp1lQ3TTP0 Gm4799-201ENSMUST00000095396 657 ntBASIC23.39■■□□□ 1.33
Shcbp1lQ3TTP0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Shcbp1lQ3TTP0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Shcbp1lQ3TTP0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Shcbp1lQ3TTP0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Shcbp1lQ3TTP0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.37■■□□□ 1.33
Shcbp1lQ3TTP0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.37■■□□□ 1.33
Shcbp1lQ3TTP0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Shcbp1lQ3TTP0 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.36■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms