Protein–RNA interactions for Protein: Q3TQB2

Foxred1, FAD-dependent oxidoreductase domain-containing protein 1, mousemouse

Predictions only

Length 487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxred1Q3TQB2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Foxred1Q3TQB2 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.44■■□□□ 1.18
Foxred1Q3TQB2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
Foxred1Q3TQB2 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Foxred1Q3TQB2 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.43■■□□□ 1.18
Foxred1Q3TQB2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Foxred1Q3TQB2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Foxred1Q3TQB2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Foxred1Q3TQB2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Foxred1Q3TQB2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.42■■□□□ 1.18
Foxred1Q3TQB2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Foxred1Q3TQB2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
Foxred1Q3TQB2 Gm11599-201ENSMUST00000118720 878 ntBASIC22.4■■□□□ 1.18
Foxred1Q3TQB2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.4■■□□□ 1.18
Foxred1Q3TQB2 Particl-201ENSMUST00000205370 1560 ntBASIC22.39■■□□□ 1.18
Foxred1Q3TQB2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Foxred1Q3TQB2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.36■■□□□ 1.17
Foxred1Q3TQB2 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Foxred1Q3TQB2 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.35■■□□□ 1.17
Foxred1Q3TQB2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Foxred1Q3TQB2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Foxred1Q3TQB2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Foxred1Q3TQB2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.34■■□□□ 1.17
Foxred1Q3TQB2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Foxred1Q3TQB2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Foxred1Q3TQB2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Foxred1Q3TQB2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Foxred1Q3TQB2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
Foxred1Q3TQB2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Foxred1Q3TQB2 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Foxred1Q3TQB2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.3■■□□□ 1.16
Foxred1Q3TQB2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Foxred1Q3TQB2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Foxred1Q3TQB2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Foxred1Q3TQB2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Foxred1Q3TQB2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.29■■□□□ 1.16
Foxred1Q3TQB2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Foxred1Q3TQB2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Foxred1Q3TQB2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Foxred1Q3TQB2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Foxred1Q3TQB2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.15
Foxred1Q3TQB2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Foxred1Q3TQB2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Foxred1Q3TQB2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.25■■□□□ 1.15
Foxred1Q3TQB2 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Foxred1Q3TQB2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Foxred1Q3TQB2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Foxred1Q3TQB2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Foxred1Q3TQB2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Foxred1Q3TQB2 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.23■■□□□ 1.15
Foxred1Q3TQB2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Foxred1Q3TQB2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Foxred1Q3TQB2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Foxred1Q3TQB2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Foxred1Q3TQB2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Foxred1Q3TQB2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Foxred1Q3TQB2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Foxred1Q3TQB2 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Foxred1Q3TQB2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Foxred1Q3TQB2 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Foxred1Q3TQB2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.17■■□□□ 1.14
Foxred1Q3TQB2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Foxred1Q3TQB2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Foxred1Q3TQB2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Foxred1Q3TQB2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Foxred1Q3TQB2 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Foxred1Q3TQB2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Foxred1Q3TQB2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Foxred1Q3TQB2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Foxred1Q3TQB2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.16■■□□□ 1.14
Foxred1Q3TQB2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Foxred1Q3TQB2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Foxred1Q3TQB2 Gm37136-201ENSMUST00000194368 194 ntBASIC22.15■■□□□ 1.14
Foxred1Q3TQB2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Foxred1Q3TQB2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.15■■□□□ 1.14
Foxred1Q3TQB2 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Foxred1Q3TQB2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Foxred1Q3TQB2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
Foxred1Q3TQB2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Foxred1Q3TQB2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Foxred1Q3TQB2 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Foxred1Q3TQB2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Foxred1Q3TQB2 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.13■■□□□ 1.13
Foxred1Q3TQB2 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.13■■□□□ 1.13
Foxred1Q3TQB2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Foxred1Q3TQB2 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Foxred1Q3TQB2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Foxred1Q3TQB2 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Foxred1Q3TQB2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Foxred1Q3TQB2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Foxred1Q3TQB2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.09■■□□□ 1.13
Foxred1Q3TQB2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.09■■□□□ 1.13
Foxred1Q3TQB2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Foxred1Q3TQB2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Foxred1Q3TQB2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Foxred1Q3TQB2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.08■■□□□ 1.13
Foxred1Q3TQB2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Foxred1Q3TQB2 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Foxred1Q3TQB2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Foxred1Q3TQB2 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms