Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Amer2-203ENSMUST00000225247 2662 ntBASIC23.4■■□□□ 1.34
Lhx1P63006 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.34
Lhx1P63006 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.39■■□□□ 1.33
Lhx1P63006 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Lhx1P63006 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.37■■□□□ 1.33
Lhx1P63006 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Lhx1P63006 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Lhx1P63006 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Lhx1P63006 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Lhx1P63006 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Lhx1P63006 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Lhx1P63006 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.33■■□□□ 1.33
Lhx1P63006 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Lhx1P63006 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Lhx1P63006 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Lhx1P63006 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.31■■□□□ 1.32
Lhx1P63006 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Lhx1P63006 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
Lhx1P63006 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Lhx1P63006 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Lhx1P63006 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Lhx1P63006 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Lhx1P63006 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Lhx1P63006 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Lhx1P63006 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.28■■□□□ 1.32
Lhx1P63006 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Lhx1P63006 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.27■■□□□ 1.32
Lhx1P63006 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Lhx1P63006 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Lhx1P63006 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Lhx1P63006 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Lhx1P63006 Gm37136-201ENSMUST00000194368 194 ntBASIC23.21■■□□□ 1.31
Lhx1P63006 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Lhx1P63006 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Lhx1P63006 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.19■■□□□ 1.3
Lhx1P63006 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Lhx1P63006 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.18■■□□□ 1.3
Lhx1P63006 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Lhx1P63006 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Lhx1P63006 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Lhx1P63006 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Lhx1P63006 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Lhx1P63006 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.17■■□□□ 1.3
Lhx1P63006 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Lhx1P63006 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.17■■□□□ 1.3
Lhx1P63006 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Lhx1P63006 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Lhx1P63006 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Lhx1P63006 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Lhx1P63006 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.15■■□□□ 1.3
Lhx1P63006 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Lhx1P63006 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
Lhx1P63006 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.14■■□□□ 1.29
Lhx1P63006 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
Lhx1P63006 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Lhx1P63006 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Lhx1P63006 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.12■■□□□ 1.29
Lhx1P63006 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Lhx1P63006 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Lhx1P63006 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Lhx1P63006 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Lhx1P63006 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Lhx1P63006 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Lhx1P63006 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Lhx1P63006 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Lhx1P63006 Gm4799-201ENSMUST00000095396 657 ntBASIC23.08■■□□□ 1.29
Lhx1P63006 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.08■■□□□ 1.29
Lhx1P63006 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.08■■□□□ 1.29
Lhx1P63006 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Lhx1P63006 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
Lhx1P63006 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.07■■□□□ 1.28
Lhx1P63006 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Lhx1P63006 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.06■■□□□ 1.28
Lhx1P63006 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Lhx1P63006 Gm6311-201ENSMUST00000073790 878 ntBASIC23.05■■□□□ 1.28
Lhx1P63006 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Lhx1P63006 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Lhx1P63006 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Lhx1P63006 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Lhx1P63006 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Lhx1P63006 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
Lhx1P63006 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Lhx1P63006 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
Lhx1P63006 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.01■■□□□ 1.27
Lhx1P63006 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.01■■□□□ 1.27
Lhx1P63006 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
Lhx1P63006 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Lhx1P63006 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Lhx1P63006 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Lhx1P63006 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
Lhx1P63006 AC154454.1-201ENSMUST00000225253 216 ntBASIC23■■□□□ 1.27
Lhx1P63006 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Lhx1P63006 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.99■■□□□ 1.27
Lhx1P63006 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.99■■□□□ 1.27
Lhx1P63006 Mir3960-201ENSMUST00000198213 73 ntBASIC22.98■■□□□ 1.27
Lhx1P63006 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Lhx1P63006 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Lhx1P63006 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Lhx1P63006 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.97■■□□□ 1.27
Lhx1P63006 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.97■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms