Protein–RNA interactions for Protein: P53044

UFD1, Ubiquitin fusion degradation protein 1, yeastyeast

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD1P53044 IGD1YFR017C 588 nt7.07□□□□□ -1.28
UFD1P53044 YKR012CYKR012C 378 nt7.07□□□□□ -1.28
UFD1P53044 SDS24YBR214W 1584 nt7.07□□□□□ -1.28
UFD1P53044 AFG2YLR397C 2343 nt7.06□□□□□ -1.28
UFD1P53044 PFS2YNL317W 1398 nt7.06□□□□□ -1.28
UFD1P53044 TOP3YLR234W 1971 nt7.06□□□□□ -1.28
UFD1P53044 TMS1YDR105C 1422 nt7.05□□□□□ -1.28
UFD1P53044 PHB2YGR231C 933 nt7.05□□□□□ -1.28
UFD1P53044 VBA3YCL069W 1377 nt7.05□□□□□ -1.28
UFD1P53044 STF1YDL130W-A 261 nt7.03□□□□□ -1.28
UFD1P53044 ADH3YMR083W 1128 nt7.03□□□□□ -1.28
UFD1P53044 GUT1YHL032C 2130 nt7.02□□□□□ -1.29
UFD1P53044 HIS3YOR202W 663 nt7.02□□□□□ -1.29
UFD1P53044 LYS20YDL182W 1287 nt7.01□□□□□ -1.29
UFD1P53044 MDH2YOL126C 1134 nt7.01□□□□□ -1.29
UFD1P53044 HSV2YGR223C 1347 nt7.01□□□□□ -1.29
UFD1P53044 ITR1YDR497C 1755 nt7□□□□□ -1.29
UFD1P53044 MSB3YNL293W 1902 nt6.99□□□□□ -1.29
UFD1P53044 CHA1YCL064C 1083 nt6.99□□□□□ -1.29
UFD1P53044 SLM3YDL033C 1254 nt6.99□□□□□ -1.29
UFD1P53044 YFR020WYFR020W 699 nt6.99□□□□□ -1.29
UFD1P53044 ABP1YCR088W 1779 nt6.99□□□□□ -1.29
UFD1P53044 ENO1YGR254W 1314 nt6.99□□□□□ -1.29
UFD1P53044 HXT13YEL069C 1695 nt6.98□□□□□ -1.29
UFD1P53044 YCR025CYCR025C 411 nt6.98□□□□□ -1.29
UFD1P53044 YJL009WYJL009W 327 nt6.98□□□□□ -1.29
UFD1P53044 RSM7YJR113C 744 nt6.98□□□□□ -1.29
UFD1P53044 ATP10YLR393W 840 nt6.98□□□□□ -1.29
UFD1P53044 IPL1YPL209C 1104 nt6.98□□□□□ -1.29
UFD1P53044 YNL040WYNL040W 1371 nt6.97□□□□□ -1.29
UFD1P53044 tA(AGC)DtA(AGC)D 73 nt6.97□□□□□ -1.29
UFD1P53044 tA(AGC)FtA(AGC)F 73 nt6.97□□□□□ -1.29
UFD1P53044 tA(AGC)GtA(AGC)G 73 nt6.97□□□□□ -1.29
UFD1P53044 tA(AGC)HtA(AGC)H 73 nt6.97□□□□□ -1.29
UFD1P53044 tA(AGC)JtA(AGC)J 73 nt6.97□□□□□ -1.29
UFD1P53044 tA(AGC)K1tA(AGC)K1 73 nt6.97□□□□□ -1.29
UFD1P53044 tA(AGC)K2tA(AGC)K2 73 nt6.97□□□□□ -1.29
UFD1P53044 tA(AGC)LtA(AGC)L 73 nt6.97□□□□□ -1.29
UFD1P53044 tA(AGC)M1tA(AGC)M1 73 nt6.97□□□□□ -1.29
UFD1P53044 tA(AGC)M2tA(AGC)M2 73 nt6.97□□□□□ -1.29
UFD1P53044 tA(AGC)PtA(AGC)P 73 nt6.97□□□□□ -1.29
UFD1P53044 MOB1YIL106W 945 nt6.97□□□□□ -1.29
UFD1P53044 FLX1YIL134W 936 nt6.97□□□□□ -1.29
UFD1P53044 YBR056WYBR056W 1506 nt6.96□□□□□ -1.29
UFD1P53044 YIR035CYIR035C 765 nt6.96□□□□□ -1.3
UFD1P53044 CYC3YAL039C 810 nt6.96□□□□□ -1.3
UFD1P53044 SLG1YOR008C 1137 nt6.95□□□□□ -1.3
UFD1P53044 NDE2YDL085W 1638 nt6.94□□□□□ -1.3
UFD1P53044 BUB2YMR055C 921 nt6.94□□□□□ -1.3
UFD1P53044 TIF3YPR163C 1311 nt6.94□□□□□ -1.3
UFD1P53044 YCP4YCR004C 744 nt6.93□□□□□ -1.3
UFD1P53044 YJR149WYJR149W 1215 nt6.93□□□□□ -1.3
UFD1P53044 SRP102YKL154W 735 nt6.93□□□□□ -1.3
UFD1P53044 CMK2YOL016C 1344 nt6.93□□□□□ -1.3
UFD1P53044 PMT7YDR307W 1989 nt6.93□□□□□ -1.3
UFD1P53044 YNL140CYNL140C 570 nt6.92□□□□□ -1.3
UFD1P53044 ATO2YNR002C 849 nt6.92□□□□□ -1.3
UFD1P53044 PRC1YMR297W 1599 nt6.91□□□□□ -1.3
UFD1P53044 YEL034C-AYEL034C-A 603 nt6.91□□□□□ -1.3
UFD1P53044 MAS2YHR024C 1449 nt6.91□□□□□ -1.3
UFD1P53044 MEP1YGR121C 1479 nt6.91□□□□□ -1.3
UFD1P53044 YLR280CYLR280C 351 nt6.89□□□□□ -1.31
UFD1P53044 BAP3YDR046C 1815 nt6.88□□□□□ -1.31
UFD1P53044 YDR510C-AYDR510C-A 117 nt6.88□□□□□ -1.31
UFD1P53044 YLR460CYLR460C 1131 nt6.88□□□□□ -1.31
UFD1P53044 RNA170RNA170 169 nt6.88□□□□□ -1.31
UFD1P53044 BUD31YCR063W 474 nt6.87□□□□□ -1.31
UFD1P53044 GLY1YEL046C 1164 nt6.87□□□□□ -1.31
UFD1P53044 INM1YHR046C 888 nt6.87□□□□□ -1.31
UFD1P53044 YIA6YIL006W 1122 nt6.87□□□□□ -1.31
UFD1P53044 ADH6YMR318C 1083 nt6.87□□□□□ -1.31
UFD1P53044 SAM50YNL026W 1455 nt6.86□□□□□ -1.31
UFD1P53044 MET22YOL064C 1074 nt6.86□□□□□ -1.31
UFD1P53044 HTS1YPR033C 1641 nt6.86□□□□□ -1.31
UFD1P53044 YJL045WYJL045W 1905 nt6.86□□□□□ -1.31
UFD1P53044 CDC13YDL220C 2775 nt6.86□□□□□ -1.31
UFD1P53044 TGL5YOR081C 2250 nt6.85□□□□□ -1.31
UFD1P53044 ERR3YMR323W 1314 nt6.85□□□□□ -1.31
UFD1P53044 ERR1YOR393W 1314 nt6.85□□□□□ -1.31
UFD1P53044 ERR2YPL281C 1314 nt6.85□□□□□ -1.31
UFD1P53044 ERO1YML130C 1692 nt6.85□□□□□ -1.31
UFD1P53044 RPL2AYFR031C-A 765 nt6.85□□□□□ -1.31
UFD1P53044 SER2YGR208W 930 nt6.85□□□□□ -1.31
UFD1P53044 CHS7YHR142W 951 nt6.85□□□□□ -1.31
UFD1P53044 ERG6YML008C 1152 nt6.85□□□□□ -1.31
UFD1P53044 RIB1YBL033C 1038 nt6.85□□□□□ -1.31
UFD1P53044 YMR253CYMR253C 1245 nt6.85□□□□□ -1.31
UFD1P53044 INO1YJL153C 1602 nt6.85□□□□□ -1.31
UFD1P53044 CKI1YLR133W 1749 nt6.84□□□□□ -1.31
UFD1P53044 YCR061WYCR061W 1896 nt6.84□□□□□ -1.31
UFD1P53044 TDA4YJR116W 840 nt6.83□□□□□ -1.32
UFD1P53044 SPE4YLR146C 903 nt6.83□□□□□ -1.32
UFD1P53044 YPL264CYPL264C 1062 nt6.83□□□□□ -1.32
UFD1P53044 HEL1YKR017C 1656 nt6.83□□□□□ -1.32
UFD1P53044 MRN1YPL184C 1839 nt6.83□□□□□ -1.32
UFD1P53044 EHT1YBR177C 1356 nt6.82□□□□□ -1.32
UFD1P53044 LRO1YNR008W 1986 nt6.82□□□□□ -1.32
UFD1P53044 FCP1YMR277W 2199 nt6.82□□□□□ -1.32
UFD1P53044 YER152CYER152C 1332 nt6.82□□□□□ -1.32
UFD1P53044 PDC6YGR087C 1692 nt6.82□□□□□ -1.32
Retrieved 100 of 7,029 protein–RNA pairs in 19.2 ms