Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Upk2P38575 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Upk2P38575 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
Upk2P38575 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Upk2P38575 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Upk2P38575 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Upk2P38575 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.74■□□□□ 0.91
Upk2P38575 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Upk2P38575 Nkain2-201ENSMUST00000092602 558 ntBASIC20.73■□□□□ 0.91
Upk2P38575 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Upk2P38575 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Upk2P38575 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Upk2P38575 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Upk2P38575 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.71■□□□□ 0.91
Upk2P38575 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
Upk2P38575 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Upk2P38575 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Upk2P38575 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Upk2P38575 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
Upk2P38575 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Upk2P38575 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Upk2P38575 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Upk2P38575 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.69■□□□□ 0.9
Upk2P38575 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.69■□□□□ 0.9
Upk2P38575 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Upk2P38575 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Upk2P38575 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Upk2P38575 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Upk2P38575 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Upk2P38575 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.67■□□□□ 0.9
Upk2P38575 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Upk2P38575 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Upk2P38575 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.67■□□□□ 0.9
Upk2P38575 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Upk2P38575 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.67■□□□□ 0.9
Upk2P38575 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Upk2P38575 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Upk2P38575 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.66■□□□□ 0.9
Upk2P38575 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Upk2P38575 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Upk2P38575 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.65■□□□□ 0.9
Upk2P38575 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Upk2P38575 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.64■□□□□ 0.89
Upk2P38575 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.64■□□□□ 0.89
Upk2P38575 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.64■□□□□ 0.89
Upk2P38575 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Upk2P38575 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Upk2P38575 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Upk2P38575 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Upk2P38575 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Upk2P38575 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Upk2P38575 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.62■□□□□ 0.89
Upk2P38575 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Upk2P38575 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Upk2P38575 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Upk2P38575 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Upk2P38575 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Upk2P38575 Particl-201ENSMUST00000205370 1560 ntBASIC20.61■□□□□ 0.89
Upk2P38575 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Upk2P38575 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Upk2P38575 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.6■□□□□ 0.89
Upk2P38575 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.6■□□□□ 0.89
Upk2P38575 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Upk2P38575 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Upk2P38575 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.59■□□□□ 0.89
Upk2P38575 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.58■□□□□ 0.89
Upk2P38575 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Upk2P38575 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Upk2P38575 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Upk2P38575 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Upk2P38575 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Upk2P38575 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Upk2P38575 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Upk2P38575 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Upk2P38575 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Upk2P38575 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Upk2P38575 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
Upk2P38575 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Upk2P38575 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Upk2P38575 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Upk2P38575 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Upk2P38575 Gm6821-201ENSMUST00000107540 542 ntBASIC20.51■□□□□ 0.87
Upk2P38575 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.51■□□□□ 0.87
Upk2P38575 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.51■□□□□ 0.87
Upk2P38575 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Upk2P38575 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Upk2P38575 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Upk2P38575 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Upk2P38575 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.5■□□□□ 0.87
Upk2P38575 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Upk2P38575 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Upk2P38575 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Upk2P38575 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Upk2P38575 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.49■□□□□ 0.87
Upk2P38575 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Upk2P38575 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Upk2P38575 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Upk2P38575 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Upk2P38575 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Upk2P38575 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms