Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Nckap1P28660 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Nckap1P28660 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Nckap1P28660 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.52■■□□□ 1.36
Nckap1P28660 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.52■■□□□ 1.36
Nckap1P28660 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
Nckap1P28660 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Nckap1P28660 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.51■■□□□ 1.35
Nckap1P28660 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.5■■□□□ 1.35
Nckap1P28660 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Nckap1P28660 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.5■■□□□ 1.35
Nckap1P28660 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.49■■□□□ 1.35
Nckap1P28660 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
Nckap1P28660 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
Nckap1P28660 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Nckap1P28660 Gm4799-201ENSMUST00000095396 657 ntBASIC23.49■■□□□ 1.35
Nckap1P28660 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Nckap1P28660 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Nckap1P28660 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
Nckap1P28660 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.47■■□□□ 1.35
Nckap1P28660 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Nckap1P28660 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Nckap1P28660 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.46■■□□□ 1.35
Nckap1P28660 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Nckap1P28660 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.35
Nckap1P28660 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Nckap1P28660 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Nckap1P28660 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Nckap1P28660 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Nckap1P28660 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Nckap1P28660 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.44■■□□□ 1.34
Nckap1P28660 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.44■■□□□ 1.34
Nckap1P28660 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Nckap1P28660 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Nckap1P28660 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Nckap1P28660 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Nckap1P28660 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Nckap1P28660 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Nckap1P28660 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Nckap1P28660 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Nckap1P28660 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.41■■□□□ 1.34
Nckap1P28660 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.39■■□□□ 1.33
Nckap1P28660 Gm37136-201ENSMUST00000194368 194 ntBASIC23.39■■□□□ 1.33
Nckap1P28660 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Nckap1P28660 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Nckap1P28660 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
Nckap1P28660 Mir3960-201ENSMUST00000198213 73 ntBASIC23.38■■□□□ 1.33
Nckap1P28660 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.38■■□□□ 1.33
Nckap1P28660 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Nckap1P28660 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Nckap1P28660 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Nckap1P28660 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Nckap1P28660 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Nckap1P28660 Scarna2-201ENSMUST00000157560 414 ntBASIC23.36■■□□□ 1.33
Nckap1P28660 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.36■■□□□ 1.33
Nckap1P28660 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Nckap1P28660 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Nckap1P28660 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Nckap1P28660 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Nckap1P28660 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.35■■□□□ 1.33
Nckap1P28660 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Nckap1P28660 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Nckap1P28660 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Nckap1P28660 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Nckap1P28660 Cap2-205ENSMUST00000225824 1634 ntBASIC23.34■■□□□ 1.33
Nckap1P28660 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Nckap1P28660 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Nckap1P28660 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
Nckap1P28660 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Nckap1P28660 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Nckap1P28660 Gm11687-201ENSMUST00000118911 886 ntBASIC23.33■■□□□ 1.33
Nckap1P28660 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC23.33■■□□□ 1.33
Nckap1P28660 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Nckap1P28660 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Nckap1P28660 Gm9806-201ENSMUST00000051080 552 ntBASIC23.32■■□□□ 1.32
Nckap1P28660 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Nckap1P28660 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Nckap1P28660 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Nckap1P28660 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Nckap1P28660 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Nckap1P28660 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Nckap1P28660 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.29■■□□□ 1.32
Nckap1P28660 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Nckap1P28660 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.29■■□□□ 1.32
Nckap1P28660 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC23.28■■□□□ 1.32
Nckap1P28660 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Nckap1P28660 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Nckap1P28660 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.27■■□□□ 1.32
Nckap1P28660 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.27■■□□□ 1.32
Nckap1P28660 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.27■■□□□ 1.32
Nckap1P28660 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
Nckap1P28660 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Nckap1P28660 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.26■■□□□ 1.31
Nckap1P28660 Gm16437-201ENSMUST00000025669 507 ntBASIC23.26■■□□□ 1.31
Nckap1P28660 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Nckap1P28660 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Nckap1P28660 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.26■■□□□ 1.31
Nckap1P28660 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Nckap1P28660 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Nckap1P28660 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms