Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Tnfrsf1aP25118 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Tnfrsf1aP25118 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfrsf1aP25118 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Tnfrsf1aP25118 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfrsf1aP25118 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfrsf1aP25118 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.61■□□□□ 0.73
Tnfrsf1aP25118 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.61■□□□□ 0.73
Tnfrsf1aP25118 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfrsf1aP25118 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfrsf1aP25118 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfrsf1aP25118 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.59■□□□□ 0.73
Tnfrsf1aP25118 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfrsf1aP25118 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfrsf1aP25118 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.58■□□□□ 0.73
Tnfrsf1aP25118 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tnfrsf1aP25118 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.58■□□□□ 0.72
Tnfrsf1aP25118 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tnfrsf1aP25118 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tnfrsf1aP25118 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfrsf1aP25118 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfrsf1aP25118 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tnfrsf1aP25118 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tnfrsf1aP25118 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tnfrsf1aP25118 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tnfrsf1aP25118 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Tnfrsf1aP25118 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfrsf1aP25118 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfrsf1aP25118 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfrsf1aP25118 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf1aP25118 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf1aP25118 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Tnfrsf1aP25118 Gm30023-201ENSMUST00000197970 889 ntBASIC19.54■□□□□ 0.72
Tnfrsf1aP25118 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
Tnfrsf1aP25118 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf1aP25118 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
Tnfrsf1aP25118 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Tnfrsf1aP25118 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Tnfrsf1aP25118 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.53■□□□□ 0.72
Tnfrsf1aP25118 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf1aP25118 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf1aP25118 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Tnfrsf1aP25118 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf1aP25118 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Tnfrsf1aP25118 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Tnfrsf1aP25118 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Tnfrsf1aP25118 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Tnfrsf1aP25118 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Tnfrsf1aP25118 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Tnfrsf1aP25118 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfrsf1aP25118 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfrsf1aP25118 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfrsf1aP25118 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfrsf1aP25118 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfrsf1aP25118 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfrsf1aP25118 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.49■□□□□ 0.71
Tnfrsf1aP25118 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfrsf1aP25118 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.49■□□□□ 0.71
Tnfrsf1aP25118 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfrsf1aP25118 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Tnfrsf1aP25118 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Tnfrsf1aP25118 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfrsf1aP25118 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfrsf1aP25118 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfrsf1aP25118 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.47■□□□□ 0.71
Tnfrsf1aP25118 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.46■□□□□ 0.71
Tnfrsf1aP25118 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf1aP25118 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf1aP25118 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf1aP25118 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf1aP25118 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf1aP25118 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Tnfrsf1aP25118 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf1aP25118 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf1aP25118 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf1aP25118 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf1aP25118 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Tnfrsf1aP25118 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf1aP25118 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf1aP25118 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf1aP25118 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf1aP25118 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf1aP25118 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.45■□□□□ 0.7
Tnfrsf1aP25118 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf1aP25118 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf1aP25118 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf1aP25118 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf1aP25118 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf1aP25118 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfrsf1aP25118 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.43■□□□□ 0.7
Tnfrsf1aP25118 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfrsf1aP25118 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfrsf1aP25118 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfrsf1aP25118 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfrsf1aP25118 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfrsf1aP25118 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfrsf1aP25118 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Tnfrsf1aP25118 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Tnfrsf1aP25118 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfrsf1aP25118 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms